Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: SS.LEW-(D10Mco84-D10Rat58)/Mco

Symbol: SS.LEW-(D10Mco84-D10Rat58)/Mco
Strain: SS.LEW-(D10Mco84-D10Rat58)
Substrain: Mco
RGD ID: 1642968
Citation ID: RRID:RGD_1642968
Ontology ID: RS:0001528
Previously known as: SS.LEW-(D10Mco84-D10Rat58)/Mco; S.LEWx12x2x3x5; SS.LEW-(D10Mco84-D10Rat58)/Mco
Type: congenic
Source: Medical College of Ohio, Toledo, Ohio, USA
Origin: This is a congenic substrain developed by crossing SS.LEW-(D10Mco84-D10Got93)/Mco to SS/Jr to get F2 which were again crossed with SS/Jr to duplicate the recombinant region
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21067,502,108 - 67,785,171RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01069,910,832 - 70,202,084RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01069,542,746 - 70,966,782RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41070,757,255 - 71,067,824RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References - curated
# Reference Title Reference Citation
1. Pleiotropic Effect of a High Resolution Mapped Blood Pressure QTL on Tumorigenesis. Cheng X, etal., PLoS One. 2016 Apr 13;11(4):e0153519. doi: 10.1371/journal.pone.0153519. eCollection 2016.
2. Augmented rififylin is a risk factor linked to aberrant cardiomyocyte function, short-QT interval and hypertension. Gopalakrishnan K, etal., Hypertension. 2011 Apr;57(4):764-71. doi: 10.1161/HYPERTENSIONAHA.110.165803. Epub 2011 Feb 28.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines
4. Congenic Interval Mapping of RNO10 Reveals a Complex Cluster of Closely-Linked Genetic Determinants of Blood Pressure. Saad Y, etal., Hypertension. 2007 Sep 24;.


Position Markers

Flank 1 / 1 (D10Mco84)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21067,502,108 - 67,502,273 (+)MAPPER
Rnor_6.01069,910,832 - 69,910,996NCBI
Rnor_5.01069,542,746 - 69,542,910UniSTS
RGSC_v3.41070,757,255 - 70,757,419UniSTS
Celera1066,448,894 - 66,449,058UniSTS
Cytogenetic Map10 RGD

Flank 2 / 1 (D10Rat58)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21067,785,009 - 67,785,171 (+)MAPPER
Rnor_6.01070,201,923 - 70,202,084NCBI
Rnor_5.01069,832,628 - 69,832,789UniSTS
Rnor_5.01070,966,621 - 70,966,782UniSTS
RGSC_v3.41071,067,299 - 71,067,824RGD
RGSC_v3.41071,067,496 - 71,067,657UniSTS
RGSC_v3.11071,080,922 - 71,081,447RGD
Celera1066,729,423 - 66,729,584UniSTS
RH 2.0 Map10693.7RGD
FHH x ACI Map1057.0099RGD
Strain QTL Data
Symbol Name Trait
Bp301 Blood pressure QTL 301 arterial blood pressure trait   (VT:2000000)    

Additional Information

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 SS.LEW-(D10Mco84-D10Rat58)/Mco    SS.LEW-(D10Mco84-D10Rat58)/Mco    Name updated 68913 APPROVED
2013-08-28 SS.LEW-(D10Mco84-D10Rat58)/Mco    SS.LEW-(D10Mco84-D10Rat58)/Mco    Name updated 68913 APPROVED