Strain Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Strain Registration

Strain: BBDP.WF-(D8Rat73-D8Rat90)/Sunn

Symbol: BBDP.WF-(D8Rat73-D8Rat90)/Sunn
Strain: BBDP.WF-(D8Rat73-D8Rat90)
Substrain: Sunn
RGD ID: 1641874
Citation ID: RRID:RGD_1641874
Ontology ID: RS:0001179
Also Known As: 8b; BBDP.WF-(D8Rat73-D8Rat90)/Sunn; BBDP.WF-(D8Rat73-D8Rat90)/Sunn
Type: congenic
Available Source: Not Available
Origination: Department of Medicine and Immunology, University of Toronto, Toronto, Ontario, Canada
Description: WF RT7.2 allele was introgressed onto the genetic background of BBDP rats and these were crossed with BBDP
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2888,552,647 - 110,572,221RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0895,257,972 - 118,862,813RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0894,761,016 - 118,204,000RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4892,863,340 - 114,974,688RGD_MAPPER_PIPELINERGSC3.4





Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "BBDP.WF-(D8Rat73-D8Rat90)/Sunn" (RS:0001179)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:
Disease Annotations     Click to see Annotation Detail View


Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. A novel susceptibility locus on rat chromosome 8 affects spontaneous but not experimentally induced type 1 diabetes. Wallis RH, etal., Diabetes. 2007 Jun;56(6):1731-6. Epub 2007 Mar 27

Region

Position Markers

Flank 1 / 1 (D8Rat73)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2888,552,647 - 88,552,853 (+)MAPPER
Rnor_6.0895,257,972 - 95,258,175NCBI
Rnor_5.0894,761,016 - 94,761,219UniSTS
RGSC_v3.4892,863,340 - 92,863,544RGD
RGSC_v3.4892,863,341 - 92,863,544UniSTS
RGSC_v3.1892,882,795 - 92,882,999RGD
Celera888,135,027 - 88,135,228UniSTS
SHRSP x BN Map849.39RGD
SHRSP x BN Map849.39UniSTS

Flank 2 / 1 (D8Rat90)
Rat AssemblyChrPosition (strand)Source
mRatBN7.28110,572,032 - 110,572,221 (+)MAPPER
Rnor_6.08118,862,625 - 118,862,813NCBI
Rnor_5.08118,203,812 - 118,204,000UniSTS
RGSC_v3.48114,974,499 - 114,974,688RGD
RGSC_v3.48114,974,500 - 114,974,688UniSTS
RGSC_v3.18114,993,954 - 114,994,143RGD
Celera8109,856,234 - 109,856,422UniSTS
SHRSP x BN Map871.8999RGD
SHRSP x BN Map871.8999UniSTS
Cytogenetic Map8q32UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other this strain shows no significant difference in age of type 1 diabetes onset between BBDP.WF-(D8Rat73-D8Rat20)/Sunn, and BBDP.WF-(D8Rat73-D8Rat121)/Sunn 1624306