Strain Report - Rat Genome Database

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Strain: SS.MNS-(D10Mco62-D10Mco31)/Jr

Symbol: SS.MNS-(D10Mco62-D10Mco31)/Jr
Strain: SS.MNS-(D10Mco62-D10Mco31)
Substrain: Jr
RGD ID: 1641871
Citation ID: RRID:RGD_1641871
Ontology ID: RS:0001542
Also Known As: S.MNSX5; SS.MNS-(D10Mco62-D10Mco31)/Jr
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio, USA
Description: This is a congenic substrain developed by crossing SS.MNS-(D10M11Mit119-D10Mit11/Jr to SS/Jr to get F2 which were again crossed with SS/Jr to duplicate the recombinant region
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21080,536,974 - 80,537,228RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01083,411,403 - 83,411,656RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01070,763,267 - 83,220,224RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41072,063,231 - 84,284,667RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
heart weight to body weight ratio

References

References - curated
# Reference Title Reference Citation
1. Two linked blood pressure quantitative trait loci on chromosome 10 defined by dahl rat congenic strains. Garrett MR, etal., Hypertension 2001 Oct;38(4):779-85.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines
3. Congenic mapping of a blood pressure QTL region on rat chromosome 10 using the Dahl salt-sensitive rat with introgressed alleles from the Milan normotensive strain. Saad Y, etal., Mamm Genome. 2008 Jan 4;.

Region

Position Markers

Flank 1 / 1 (D10Mco62)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01070,763,268 - 70,763,527NCBI
Rnor_5.01070,763,267 - 70,763,527NCBI
RGSC_v3.41072,063,231 - 72,063,491RGD
RGSC_v3.41072,063,232 - 72,063,491UniSTS
RGSC_v3.11072,077,601 - 72,077,861RGD
Celera1067,653,001 - 67,653,260UniSTS
Cytogenetic Map10 RGD

Flank 2 / 1 (D10Mco31)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21080,536,974 - 80,537,228 (+)MAPPER
Rnor_6.01083,411,403 - 83,411,656NCBI
Rnor_5.01083,219,971 - 83,220,224UniSTS
RGSC_v3.41084,284,413 - 84,284,667RGD
RGSC_v3.41084,284,414 - 84,284,667UniSTS
RGSC_v3.11084,298,783 - 84,299,037RGD
Celera1079,308,972 - 79,309,225UniSTS
Cytogenetic Map10 RGD
Strain QTL Data
Symbol Name Trait
Bp303 Blood pressure QTL 303 arterial blood pressure trait   (VT:2000000)    

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 SS.MNS-(D10Mco62-D10Mco31)/Jr    SS.MNS-(D10Mco62-D10Mco31)/Jr    Name updated 68913 APPROVED
2013-08-28 SS.MNS-(D10Mco62-D10Mco31)/Jr    SS.MNS-(D10Mco62-D10Mco31)/Jr    Name updated 68913 APPROVED