Strain Report - Rat Genome Database

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Strain: SHR.F344-(D12Mgh5-D12Mgh6)/Snk

Symbol: SHR.F344-(D12Mgh5-D12Mgh6)/Snk
Strain: SHR.F344-(D12Mgh5-D12Mgh6)
Substrain: Snk
RGD ID: 1600338
Citation ID: RRID:RGD_1600338
Ontology ID: RS:0001419
Also Known As: SHR.F344-(D12Mgh5-D12Mgh6)/Snk; CG
Type: congenic
Available Source: Not Available
Origination: Medicinal Safety Research Laboratories, Sankyo Co. Ltd., Shizuoka, Japan
Description: Segment of chr 12 was introgressed from normotensive F344/Snk into SHR/Snk by the speed congenic technique
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21228,064,433 - 28,064,557RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01231,723,565 - 31,723,688RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01233,647,399 - 33,647,522RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41229,130,180 - 42,387,195RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Congenic substitution mapping for intracellular ca(2+) in spontaneously hypertensive rats. Ohno Y, etal., Am J Hypertens. 2007 Feb;20(2):172-6.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D12Mgh5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21228,064,433 - 28,064,557 (+)MAPPER
Rnor_6.01231,723,565 - 31,723,688NCBI
Rnor_5.01233,647,399 - 33,647,522UniSTS
RGSC_v3.41229,130,180 - 29,130,304RGD
RGSC_v3.41229,130,181 - 29,130,304UniSTS
RGSC_v3.11228,993,569 - 28,993,692RGD
Celera1229,756,877 - 29,756,993UniSTS
RH 3.4 Map12466.8UniSTS
RH 3.4 Map12466.8RGD
RH 2.0 Map12343.2RGD
SHRSP x BN Map1231.95RGD
Cytogenetic Map12 RGD

Flank 2 / 1 (D12Mgh6)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.41242,387,056 - 42,387,195UniSTS
Celera1242,747,219 - 42,747,358UniSTS
RH 3.4 Map12772.72RGD
RH 2.0 Map12534.5RGD
Cytogenetic Map12 RGD
Strain QTL Data
Symbol Name Trait
Calcic2 Intracellular calcium level QTL 2 platelet physiology trait   (VT:0005464)    

Additional Information