Strain Report - Rat Genome Database

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Strain: ACI.FHH-(D1Rat384-D1Rat156)/Eur

Symbol: ACI.FHH-(D1Rat384-D1Rat156)/Eur
Strain: ACI.FHH-(D1Rat384-D1Rat156)
Substrain: Eur
RGD ID: 1598800
Citation ID: RRID:RGD_1598800
Ontology ID: RS:0001165
Also Known As: Rf-1B; ACI.FHH-(D1Rat384-D1Rat156)/Eur; ACI.FHH-(D1Rat384-D1Rat156)/Eur
Type: congenic
Available Source: Not Available
Origination: Department of Pediatric Surgery, Erasmus Medical Center, Rotterdam, Netherlands
Description: Congenic strain which was generated using the speed congenic strategy by backcrossing ACI/Eur and FHH/Eur parental strains. Rf1 QTL region of chr 1 is introgressed in this strain.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21223,390,805 - 223,390,953RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01243,737,319 - 243,737,466RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01250,993,318 - 279,213,254RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41229,184,432 - 253,410,500RGD_MAPPER_PIPELINERGSC3.4





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Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Absence of an interaction between the Rf-1 and Rf-5 QTLs influencing susceptibility to renal damage in rats. van Dijk SJ, etal., Nephron Exp Nephrol. 2006;104(3):e96-e102. Epub 2006 Jul 12.

Region

Position Markers

Flank 1 / 1 (D1Rat384)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21223,390,805 - 223,390,953 (+)MAPPER
Rnor_6.01243,737,319 - 243,737,466NCBI
Rnor_5.01250,993,318 - 250,993,465UniSTS
RGSC_v3.41229,184,432 - 229,184,580RGD
RGSC_v3.41229,184,433 - 229,184,580UniSTS
RGSC_v3.11229,348,455 - 229,348,603RGD
Celera1220,590,914 - 220,591,059UniSTS
FHH x ACI Map1111.21RGD
FHH x ACI Map1111.21UniSTS

Flank 2 / 1 (D1Rat156)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01278,806,691 - 278,806,872NCBI
Rnor_5.01275,206,530 - 275,206,711NCBI
Rnor_5.01275,206,529 - 275,206,711NCBI
Rnor_5.01279,213,072 - 279,213,253NCBI
Rnor_5.01279,213,072 - 279,213,254NCBI
Rnor_5.01278,806,690 - 278,806,872NCBI
RGSC_v3.41253,410,320 - 253,410,500UniSTS
RGSC_v3.41253,410,319 - 253,410,500RGD
RGSC_v3.11253,675,064 - 253,675,244RGD
Celera1242,650,967 - 242,651,347UniSTS
RH 3.4 Map11648.1RGD
RH 3.4 Map11648.1UniSTS
RH 2.0 Map11263.6RGD
SHRSP x BN Map1139.09RGD
FHH x ACI Map1131.4099RGD
Cytogenetic Map1q54UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem These have impaired renal autoregulation. 1582571