Strain Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Strain Registration

Strain: FHH.FHH.1BN-(D1Rat234-D1Rat265)/Mcwi

Symbol: FHH.FHH.1BN-(D1Rat234-D1Rat265)/Mcwi
Strain: FHH.FHH.1BN-(D1Rat234-D1Rat265)
Substrain: Mcwi
RGD ID: 1582196
Citation ID: RRID:RGD_1582196
Ontology ID: RS:0001309
Also Known As: line A; FHH.FHH.1BN-(D1Rat234-D1Rat265)/Mcwi; FHH.FHH.1BN-(D1Rat234-D1Rat265)/Mcwi; FHH.FHH.1^[BN]-(D1Rat234-D1Rat265)/Mcwi
Type: congenic
Available Source: Not Available
Origination: Medical College of Wisconsin, Milwaukee, Wisconsin
Description: FHH-1BN/Mcwi was backcrossed with FHH/EurMcwi to generate these rats.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2190,664,883 - 90,665,040RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0194,364,073 - 94,364,229RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0195,453,405 - 95,453,561RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4141,225,047 - 90,449,243RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Identification of a QTL on chromosome 1 for impaired autoregulation of RBF in fawn-hooded hypertensive rats. Lopez B, etal., Am J Physiol Renal Physiol. 2006 May;290(5):F1213-21. Epub 2005 Nov 22.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D1Rat234)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.4141,225,048 - 41,225,199UniSTS
RGSC_v3.4141,225,047 - 41,225,199RGD
RGSC_v3.1141,227,993 - 41,228,144RGD
Celera142,702,392 - 42,702,542UniSTS
RH 3.4 Map1536.4UniSTS
RH 3.4 Map1536.4RGD
RH 2.0 Map1271.1RGD
SHRSP x BN Map122.7299RGD
FHH x ACI Map127.8699RGD

Flank 2 / 1 (D1Rat265)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2190,664,883 - 90,665,040 (+)MAPPER
Rnor_6.0194,364,073 - 94,364,229NCBI
Rnor_5.0195,453,405 - 95,453,561UniSTS
RGSC_v3.4190,448,902 - 90,449,243RGD
RGSC_v3.4190,449,000 - 90,449,156UniSTS
RGSC_v3.1190,527,111 - 90,527,267RGD
Celera184,998,195 - 84,998,351UniSTS
RH 3.4 Map1886.1RGD
RH 3.4 Map1886.1UniSTS
RH 2.0 Map1588.2RGD
SHRSP x BN Map144.5299RGD
Cytogenetic Map1q22UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other This is a control strain which does not have the Rf-1 and Rf-2 regions of chr 1 which includes the QTL region near marker D1Rat376. 1579884