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Strain Registration

Strain: DA.ACI-(D15Rat6-D15Rat48)/Kini

Symbol: DA.ACI-(D15Rat6-D15Rat48)/Kini
Strain: DA.ACI-(D15Rat6-D15Rat48)
Substrain: Kini
Full Name: DA.ACI-(D15Rat6-D15Rat48)/Kini
RGD ID: 1581621
Citation ID: RRID:RGD_1581621
Ontology ID: RS:0001222
Also Known As: C15R3a; DA.ACI-(D15Rat6-D15Rat48)/Kini
Type: congenic
Available Source: Not Available
Origination: Center for Molecular Medicine, Department of Clinical Neuroscience, Neuroimmunology Unit, Karolinska Institutet, SE-17176 Stockholm, Sweden
Description: This congenic strain contains an ACI chromosome 15 segment transferred to the DA background strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21528,030,665 - 55,302,115RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01533,219,101 - 62,301,382RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01537,103,190 - 65,959,514RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41532,638,412 - 61,161,186RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Eae19, a new locus on rat chromosome 15 regulating experimental autoimmune encephalomyelitis. Sheng JR, etal., Genetics 2005 May;170(1):283-9. Epub 2005 Feb 16.

Region

Position Markers

Flank 1 / 1 (D15Rat6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21528,030,665 - 28,030,847 (+)MAPPER
Rnor_6.01533,219,101 - 33,219,282NCBI
Rnor_5.01537,103,190 - 37,103,371UniSTS
RGSC_v3.41532,638,412 - 32,638,778RGD
RGSC_v3.41532,638,506 - 32,638,707UniSTS
RGSC_v3.11532,654,112 - 32,654,478RGD
RH 2.0 Map15174.3RGD
SHRSP x BN Map1525.6198RGD
Cytogenetic Map15p13UniSTS

Flank 2 / 1 (D15Rat48)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21555,301,907 - 55,302,115 (+)MAPPER
Rnor_6.01562,301,177 - 62,301,382NCBI
Rnor_5.01565,959,309 - 65,959,514UniSTS
RGSC_v3.41561,160,980 - 61,161,186RGD
RGSC_v3.41561,160,981 - 61,161,186UniSTS
RGSC_v3.11561,176,737 - 61,177,038RGD
Celera1554,876,077 - 54,876,276UniSTS
SHRSP x BN Map1539.1199UniSTS
SHRSP x BN Map1539.1199RGD
FHH x ACI Map1547.39RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_immunology No significant difference observed between experimental allergic encephalomyelitis (Eae) scores of the congenic strain and DA parental background strain 1549617