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Strain Registration

Strain: DA.ACI-(D15Rat23-D15Rat71)/Kini

Symbol: DA.ACI-(D15Rat23-D15Rat71)/Kini
Strain: DA.ACI-(D15Rat23-D15Rat71)
Substrain: Kini
Full Name: DA.ACI-(D15Rat23-D15Rat71)/Kini
RGD ID: 1581616
Citation ID: RRID:RGD_1581616
Ontology ID: RS:0001220
Also Known As: C15R4; DA.ACI-(D15Rat23-D15Rat71)/Kini
Type: congenic
Available Source: Not Available
Origination: Center for Molecular Medicine, Department of Clinical Neuroscience, Neuroimmunology Unit, Karolinska Institutet, SE-17176 Stockholm, Sweden
Description: This congenic strain contains an ACI chromosome 15 segment transferred to the DA background strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21576,003,569 - 78,330,139RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01583,647,062 - 86,002,030RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01587,155,990 - 89,768,452RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41583,040,937 - 85,456,512RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Eae19, a new locus on rat chromosome 15 regulating experimental autoimmune encephalomyelitis. Sheng JR, etal., Genetics 2005 May;170(1):283-9. Epub 2005 Feb 16.

Region

Position Markers

Flank 1 / 1 (D15Rat23)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21576,003,569 - 76,003,707 (+)MAPPER
Rnor_6.01583,647,062 - 83,647,199NCBI
Rnor_5.01587,155,990 - 87,156,127UniSTS
RGSC_v3.41583,040,937 - 83,041,075RGD
RGSC_v3.41583,040,938 - 83,041,075UniSTS
RGSC_v3.11583,056,718 - 83,056,855RGD
Celera1575,244,181 - 75,244,318UniSTS
RH 3.4 Map15521.2UniSTS
RH 3.4 Map15521.2RGD
SHRSP x BN Map1546.4098UniSTS
SHRSP x BN Map1546.4098RGD
Cytogenetic Map15q21UniSTS

Flank 2 / 1 (D15Rat71)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21578,329,942 - 78,330,139 (+)MAPPER
Rnor_6.01586,001,834 - 86,002,030NCBI
Rnor_5.01589,768,256 - 89,768,452UniSTS
RGSC_v3.41585,456,316 - 85,456,512UniSTS
RGSC_v3.41585,456,315 - 85,456,512RGD
RGSC_v3.11585,472,096 - 85,472,292RGD
Celera1577,523,991 - 77,524,187UniSTS
RH 3.4 Map15541.3RGD
RH 3.4 Map15541.3UniSTS
RH 2.0 Map15419.4RGD
SHRSP x BN Map1550.5798RGD
FHH x ACI Map1563.69RGD
Cytogenetic Map15q21UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_immunology congenic strain has experimental allergic encephalomyelitis (Eae) scores lower than those observed in DA parental background 1549617