Strain Report - Rat Genome Database

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Strain: SS.LEW-(D10Mco30-D10Got92)/Ayd

Symbol: SS.LEW-(D10Mco30-D10Got92)/Ayd
Strain: SS.LEW-(D10Mco30-D10Got92)
Substrain: Ayd
RGD ID: 1579914
Citation ID: RRID:RGD_1579914
Ontology ID: RS:0001522
Previously known as: C10S.L22;SS.LEW-(D10Mco30-D10Got92)/Ayd; SS.LEW-(D10Mco30-D10Got92)/Ayd
Type: congenic
Source: Research Centre, Centre Hospitalier de l'Universite de Montreal (CHUM), Montreal, Quebec, Canada
Origin: A sub congenic strain derived from the progenitor strain SS.LEW-(D10Rat27-Igfbp4)/Ayd.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21073,887,148 - 74,372,232RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01076,420,583 - 77,055,888RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01073,693,979 - 76,919,627RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41077,547,289 - 77,956,387RGD_MAPPER_PIPELINERGSC3.4

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mean arterial blood pressure


References - curated
# Reference Title Reference Citation
1. Epistasis, not numbers, regulates functions of clustered Dahl rat quantitative trait loci applicable to human hypertension. Charron S, etal., Hypertension. 2005 Dec;46(6):1300-8. Epub 2005 Nov 14.
2. Submegabase resolution of epistatically interacting quantitative trait loci for blood pressure applicable for essential hypertension. Chauvet C, etal., J Hypertens. 2008 May;26(5):893-901.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D10Mco30)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21073,887,148 - 73,887,455 (+)MAPPER
Rnor_6.01076,420,583 - 76,420,889NCBI
Rnor_5.01073,693,979 - 73,694,285UniSTS
RGSC_v3.41077,547,353 - 77,547,622RGD
RGSC_v3.41077,547,289 - 77,547,595UniSTS
RGSC_v3.11077,561,658 - 77,561,965RGD
Celera1072,791,736 - 72,792,042UniSTS
Cytogenetic Map10 RGD

Flank 2 / 1 (D10Got92)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21074,372,084 - 74,372,232 (+)MAPPER
Rnor_6.01077,055,741 - 77,055,888NCBI
Rnor_5.01076,919,480 - 76,919,627UniSTS
RGSC_v3.41077,956,239 - 77,956,387RGD
RGSC_v3.41077,956,240 - 77,956,387UniSTS
RGSC_v3.11077,970,610 - 77,970,757RGD
Celera1073,270,689 - 73,270,836UniSTS
RH 3.4 Map10682.49UniSTS
RH 3.4 Map10682.49RGD
RH 2.0 Map10787.2RGD
Strain QTL Data
Symbol Name Trait
Bp281 Blood pressure QTL 281 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem Strain showed mean arterial pressure of 185 mmHg which was increased from parental SS strain and from progenitor congenic strain SS.LEW-(D10Rat27-Igfbp4)/Ayd. 1559293