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Strain Registration

Strain: SS.LEW-(D10Chm128-D10Chm169)/Ayd

Symbol: SS.LEW-(D10Chm128-D10Chm169)/Ayd
Strain: SS.LEW-(D10Chm128-D10Chm169)
Substrain: Ayd
RGD ID: 1579907
Citation ID: RRID:RGD_1579907
Ontology ID: RS:0001509
Previously known as: SS.LEW-(D10Chm128-D10Chm169)/Ayd; C10S.L24
Type: congenic
Source: Research Centre, Centre Hospitalier de l'Universite de Montreal (CHUM), Montreal, Quebec, Canada
Origin: A sub congenic strain derived from the progenitor strain SS.LEW-(D10Wox51-D10Rat27)/Ayd.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21067,232,398 - 67,400,546RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01069,638,898 - 69,809,020RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01069,272,915 - 69,442,411RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41070,486,334 - 70,654,393RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Epistasis, not numbers, regulates functions of clustered Dahl rat quantitative trait loci applicable to human hypertension. Charron S, etal., Hypertension. 2005 Dec;46(6):1300-8. Epub 2005 Nov 14.
2. Submegabase resolution of epistatically interacting quantitative trait loci for blood pressure applicable for essential hypertension. Chauvet C, etal., J Hypertens. 2008 May;26(5):893-901.
3. Distinct quantitative trait loci for kidney, cardiac, and aortic mass dissociated from and associated with blood pressure in Dahl congenic rats. Duong C, etal., Mamm Genome. 2006 Dec;17(12):1147-61. Epub 2006 Dec 1.
4. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Chm128)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21067,232,398 - 67,232,568 (+)MAPPER
Rnor_6.01069,638,898 - 69,639,069NCBI
Rnor_5.01069,272,915 - 69,273,086UniSTS
RGSC_v3.41070,486,334 - 70,486,505UniSTS
Celera1066,179,149 - 66,179,324UniSTS
Cytogenetic Map10 RGD

Flank 2 / 1 (D10Chm169)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21067,400,316 - 67,400,546 (+)MAPPER
Rnor_6.01069,808,793 - 69,809,020NCBI
Rnor_5.01069,442,184 - 69,442,411UniSTS
RGSC_v3.41070,654,166 - 70,654,393UniSTS
Celera1066,347,242 - 66,347,469UniSTS
Cytogenetic Map10 RGD
Strain QTL Data
Symbol Name Trait
Am15 Aortic mass QTL 15 aorta mass   (VT:0002845)    
Cm113 Cardiac mass QTL 113 heart left ventricle mass   (VT:0007031)    
Cm114 Cardiac mass QTL 114 heart right ventricle mass   (VT:0007033)    
Cm69 Cardiac mass QTL 69 heart mass   (VT:0007028)    
Kidm58 Kidney mass QTL 58 kidney mass   (VT:0002707)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem Strain showed mean arterial pressure of 184 mmHg which was increased from parental SS strain and increased from progenitor congenic strain SS.LEW-(D10Wox51-D10Rat27)/Ayd. 1559293