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Strain Registration

Strain: SS.LEW-(D10Chm128-D10Chm121)/Ayd

Symbol: SS.LEW-(D10Chm128-D10Chm121)/Ayd
Strain: SS.LEW-(D10Chm128-D10Chm121)
Substrain: Ayd
RGD ID: 1579898
Citation ID: RRID:RGD_1579898
Ontology ID: RS:0001510
Previously known as: C10S.L15;SS.LEW-(D10Chm128-D10Chm182)/Ayd; c10s.l15; SS.LEW-(D10Chm128-D10Chm121)/Ayd
Type: congenic
Source: Research Centre, Centre Hospitalier de l'Universite de Montreal (CHUM), Montreal, Quebec, Canada
Origin: A sub congenic strain derived from the progenitor strain SS.LEW-(D10Wox51-D10Rat27)/Ayd.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21067,232,398 - 68,082,614RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01069,638,898 - 70,499,629RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01069,272,915 - 71,014,829RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41070,486,334 - 71,365,656RGD_MAPPER_PIPELINERGSC3.4





References

References - curated
# Reference Title Reference Citation
1. Epistasis, not numbers, regulates functions of clustered Dahl rat quantitative trait loci applicable to human hypertension. Charron S, etal., Hypertension. 2005 Dec;46(6):1300-8. Epub 2005 Nov 14.
2. Submegabase resolution of epistatically interacting quantitative trait loci for blood pressure applicable for essential hypertension. Chauvet C, etal., J Hypertens. 2008 May;26(5):893-901.
3. Distinct quantitative trait loci for kidney, cardiac, and aortic mass dissociated from and associated with blood pressure in Dahl congenic rats. Duong C, etal., Mamm Genome. 2006 Dec;17(12):1147-61. Epub 2006 Dec 1.
4. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Chm128)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21067,232,398 - 67,232,568 (+)MAPPER
Rnor_6.01069,638,898 - 69,639,069NCBI
Rnor_5.01069,272,915 - 69,273,086UniSTS
RGSC_v3.41070,486,334 - 70,486,505UniSTS
Celera1066,179,149 - 66,179,324UniSTS
Cytogenetic Map10 RGD

Flank 2 / 1 (D10Chm121)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21068,082,368 - 68,082,614 (+)MAPPER
Rnor_6.01070,499,384 - 70,499,629NCBI
Rnor_5.01071,014,584 - 71,014,829UniSTS
Rnor_5.01070,133,211 - 70,133,456UniSTS
RGSC_v3.41071,365,411 - 71,365,656UniSTS
Celera1067,024,978 - 67,025,223UniSTS
Cytogenetic Map10q26UniSTS
Strain QTL Data
Symbol Name Trait
Am12 Aortic mass QTL 12 aorta mass   (VT:0002845)    
Bp282 Blood pressure QTL 282 arterial blood pressure trait   (VT:2000000)    
Cm105 Cardiac mass QTL 105 heart mass   (VT:0007028)    
Cm106 Cardiac mass QTL 106 heart left ventricle mass   (VT:0007031)    
Kidm66 Kidney mass QTL 66 kidney mass   (VT:0002707)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem Strain showed mean arterial pressure of 133 mmHg which was decreased from parental SS strain and decreased from progenitor congenic strain SS.LEW-(D10Wox51-D10Rat27)/Ayd. 1559293

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-06-25 SS.LEW-(D10Chm128-D10Chm121)/Ayd    SS.LEW-(D10Chm128-D10Chm182)/Ayd    Symbol updated 68687 APPROVED
2013-06-25 SS.LEW-(D10Chm128-D10Chm121)/Ayd    SS.LEW-(D10Chm128-D10Chm182)/Ayd    Name updated 68913 APPROVED
2013-06-25 SS.LEW-(D10Chm128-D10Chm121)/Ayd    SS.LEW-(D10Chm128-D10Chm182)/Ayd    Symbol updated 68687 APPROVED
2013-06-25 SS.LEW-(D10Chm128-D10Chm121)/Ayd    SS.LEW-(D10Chm128-D10Chm182)/Ayd    Name updated 68913 APPROVED