Strain Report - Rat Genome Database

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Strain: SS.SHR-(D2Rat61-D2Mco18)/Mco

Symbol: SS.SHR-(D2Rat61-D2Mco18)/Mco
Strain: SS.SHR-(D2Rat61-D2Mco18)
Substrain: Mco
RGD ID: 1579703
Citation ID: RRID:RGD_1579703
Ontology ID: RS:0001559
Also known as: S.SHR(2); SS.SHR-(D2Rat61-D2Mco18)/Mco
Type: congenic
Source: Medical College of Ohio, Toledo, Ohio
Origin: Congenic strain from the parental SS/Jr and SHR/NHsd inbred strains.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21879,924,734 - 79,925,127RGD_MAPPER_PIPELINEmRatBN7.2
mRatBN7.2278,665,619 - 78,665,763RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0268,865,414 - 80,632,096RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0288,594,475 - 100,298,539RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4279,796,833 - 227,150,249RGD_MAPPER_PIPELINERGSC3.4



Position Markers

Flank 1 / 1 (D2Rat61)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21879,924,734 - 79,925,127 (+)MAPPER
Rnor_6.0268,865,414 - 68,866,454NCBI
Rnor_5.0288,594,475 - 88,595,515UniSTS
RGSC_v3.42227,150,052 - 227,150,249UniSTS
RGSC_v3.42227,150,051 - 227,150,248RGD
RGSC_v3.12227,136,731 - 227,136,928RGD
Celera2210,543,293 - 210,543,469UniSTS
RH 3.4 Map21546.8RGD
RH 3.4 Map21546.8UniSTS
RH 2.0 Map21129.9RGD
SHRSP x BN Map288.6498RGD
FHH x ACI Map2101.7399RGD
Cytogenetic Map2q42-q43UniSTS

Flank 2 / 1 (D2Mco18)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2278,665,619 - 78,665,763 (+)MAPPER
Rnor_6.0280,631,953 - 80,632,096NCBI
Rnor_5.02100,298,396 - 100,298,539UniSTS
RGSC_v3.4279,796,833 - 79,796,977RGD
RGSC_v3.4279,796,834 - 79,796,977UniSTS
RGSC_v3.1279,741,795 - 79,741,939RGD
Celera274,301,003 - 74,301,146UniSTS
Cytogenetic Map2q22UniSTS
Strain QTL Data
Symbol Name Trait
Pur7 Proteinuria QTL 7 total urine protein amount   (VT:0000032)    
Uae32 Urinary albumin excretion QTL 32 urine protein amount   (VT:0005160)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem Congenic strain had a significantly lower urine protein and albumin excretion levels than the SS parental strain and urine albumin level was significantly higher than SHR parental strain. 1578520