Strain Report - Rat Genome Database

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Strain: SS.SHR-(D13Rat63-D13Mit1)/Mco

Symbol: SS.SHR-(D13Rat63-D13Mit1)/Mco
Strain: SS.SHR-(D13Rat63-D13Mit1)
Substrain: Mco
RGD ID: 1579697
Citation ID: RRID:RGD_1579697
Ontology ID: RS:0001556
Also known as: S.SHR(13); SS.SHR-(D13Rat63-D13Mit1)/Mco; SS.SHR-(D13Mit1-D13Rat63)/Mco
Type: congenic
Source: Medical College of Ohio, Toledo, Ohio
Origin: Congenic strain from the parental SS/Jr and SHR/NHsd inbred strains.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2135,994,668 - 77,046,890RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0139,016,742 - 82,995,671RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01314,281,836 - 87,877,411RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41325,430,110 - 80,482,429RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View
proteinuria  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype



Position Markers

Flank 1 / 1 (D13Rat63)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21377,046,787 - 77,046,890 (+)MAPPER
Rnor_6.01382,995,569 - 82,995,671NCBI
Rnor_5.01387,877,309 - 87,877,411UniSTS
RGSC_v3.41380,482,327 - 80,482,429UniSTS
RGSC_v3.41380,482,326 - 80,482,429RGD
RGSC_v3.11380,496,515 - 80,496,617RGD
Celera1376,764,693 - 76,764,795UniSTS
RH 3.4 Map13487.9RGD
RH 3.4 Map13487.9UniSTS
RH 2.0 Map13562.3RGD
SHRSP x BN Map1332.2899RGD

Flank 2 / 1 (D13Mit1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2135,994,668 - 5,994,833 (+)MAPPER
Rnor_6.0139,016,742 - 9,016,906NCBI
Rnor_5.01314,281,836 - 14,282,000UniSTS
RGSC_v3.41325,430,112 - 25,430,276UniSTS
RGSC_v3.41325,430,110 - 25,430,276RGD
RGSC_v3.11244,201,730 - 44,202,014RGD
Celera136,931,166 - 6,931,330UniSTS
SHRSP x BN Map130.0UniSTS
SHRSP x BN Map130.0RGD
FHH x ACI Map130.0RGD
Cytogenetic Map13 RGD
Strain QTL Data
Symbol Name Trait
Pur11 Proteinuria QTL 11 urine albumin amount   (VT:0002871)    
Uae36 Urinary albumin excretion QTL 36 urine albumin amount   (VT:0002871)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem Congenic strain showed a greater fold reduction in urine albumin excretion level than urine protein excretion level compared to the SS parental strain. 1578520