Strain Report - Rat Genome Database

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Strain: SS.SHR-(D6Wox13-D6Rat84)/Mco

Symbol: SS.SHR-(D6Wox13-D6Rat84)/Mco
Strain: SS.SHR-(D6Wox13-D6Rat84)
Substrain: Mco
RGD ID: 1579696
Citation ID: RRID:RGD_1579696
Ontology ID: RS:0001560
Also known as: S.SHR(6); SS.SHR-(D6Wox13-D6Rat84)/Mco
Type: congenic
Source: Medical College of Ohio, Toledo, Ohio
Origin: Congenic strain from the parental SS/Jr and SHR/NHsd inbred strains.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26130,729,205 - 130,729,475RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.06136,142,742 - 136,143,011RGD_MAPPER_PIPELINERnor6.0
Rnor_5.06144,273,721 - 144,273,990RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.46136,451,997 - 136,452,267RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
1. Garrett MR, etal., Physiol Genomics. 2006 Mar 13;25(1):39-49.
2. RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D6Wox13)
Rat AssemblyChrPosition (strand)Source
mRatBN7.26130,729,205 - 130,729,475 (+)MAPPER
Rnor_6.06136,142,742 - 136,143,011NCBI
Rnor_5.06144,273,721 - 144,273,990UniSTS
RGSC_v3.46136,451,997 - 136,452,267RGD
RGSC_v3.46136,451,998 - 136,452,267UniSTS
RGSC_v3.16136,458,184 - 136,458,454RGD
Celera6128,284,545 - 128,284,814UniSTS
RH 2.0 Map20692.9RGD
Cytogenetic Map6q32UniSTS

Flank 2 / 1 (D6Rat84)
Rat AssemblyChrPosition (strand)Source
Celera633,259,123 - 33,259,316UniSTS
RH 3.4 Map6126.08RGD
RH 3.4 Map6126.08UniSTS
RH 2.0 Map6271.9RGD
SHRSP x BN Map628.5199RGD
FHH x ACI Map630.3999RGD
Cytogenetic Map6q14UniSTS
Strain QTL Data
Symbol Name Trait
Pur8 Proteinuria QTL 8 total urine protein amount   (VT:0000032)    
Uae33 Urinary albumin excretion QTL 33 urine albumin amount   (VT:0002871)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem Congenic strain showed a greater fold reduction in urine albumin excretion level than urine protein excretion level compared to the SS parental strain. 1578520