Strain Report - Rat Genome Database

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Strain: LEW.BN-(D10Mco17-D10Mco14)/Ciml

Symbol: LEW.BN-(D10Mco17-D10Mco14)/Ciml
Strain: LEW.BN-(D10Mco17-D10Mco14)
Substrain: Ciml
RGD ID: 1578706
Citation ID: RRID:RGD_1578706
Ontology ID: RS:0001356
Previously known as: LEW.BNc10-H; LEW.BN-(D10Mco17-D10Mco14)/Ciml
Type: congenic
Source: Institut National de la Sante et de la Recherche Medicale, Toulouse, France
Origin: Congenic strain created from parental LEW/Rj and BN/Rj strains.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21043,593,509 - 43,593,911RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01045,157,430 - 45,157,831RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01044,914,976 - 44,915,377RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41045,105,978 - 45,106,380RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View
toxoplasmosis  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. The rat Toxo1 locus directs toxoplasmosis outcome and controls parasite proliferation and spreading by macrophage-dependent mechanisms. Cavailles P, etal., Proc Natl Acad Sci U S A. 2006 Jan 17;103(3):744-9. Epub 2006 Jan 6.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Mco17)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21043,593,509 - 43,593,911 (+)MAPPER
Rnor_6.01045,157,430 - 45,157,831NCBI
Rnor_5.01044,914,976 - 44,915,377UniSTS
RGSC_v3.41045,105,978 - 45,106,380RGD
RGSC_v3.41045,105,979 - 45,106,380UniSTS
RGSC_v3.11045,119,601 - 45,120,003RGD
Celera1042,864,444 - 42,864,845UniSTS
Cytogenetic Map10q22UniSTS

Flank 2 / 1 (D10Mco14)
Rat AssemblyChrPosition (strand)Source
Cytogenetic Map10 RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_infection Congenic strain showed resistance to infection from Toxoplasma gondii. 1578521