Strain Report - Rat Genome Database

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Strain: LEW.BN-(D10Arb4-D10Rat133)/Ciml

Symbol: LEW.BN-(D10Arb4-D10Rat133)/Ciml
Strain: LEW.BN-(D10Arb4-D10Rat133)
Substrain: Ciml
RGD ID: 1578705
Citation ID: RRID:RGD_1578705
Ontology ID: RS:0001355
Previously known as: LEW.BNc10-C; LEW.BN-(D10Arb4-D10Rat133)/Ciml
Type: congenic
Source: Institut National de la Sante et de la Recherche Medicale, Toulouse, France
Origin: Congenic strain created from parental LEW/Rj and BN/Rj strains.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21045,274,234 - 45,274,336RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01046,835,584 - 46,835,685RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01046,591,952 - 64,823,355RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41046,737,116 - 65,668,639RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View
toxoplasmosis  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. The rat Toxo1 locus directs toxoplasmosis outcome and controls parasite proliferation and spreading by macrophage-dependent mechanisms. Cavailles P, etal., Proc Natl Acad Sci U S A. 2006 Jan 17;103(3):744-9. Epub 2006 Jan 6.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Arb4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21045,274,234 - 45,274,336 (+)MAPPER
Rnor_6.01046,835,584 - 46,835,685NCBI
Rnor_5.01046,591,952 - 46,592,053UniSTS
RGSC_v3.41046,737,116 - 46,737,218RGD
RGSC_v3.41046,737,117 - 46,737,218UniSTS
RGSC_v3.11046,750,739 - 46,750,841RGD
Celera1044,531,043 - 44,531,144UniSTS
Cytogenetic Map10 RGD

Flank 2 / 1 (D10Rat133)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01064,823,161 - 64,823,355NCBI
RGSC_v3.41065,668,446 - 65,668,639RGD
RGSC_v3.11065,682,069 - 65,682,262RGD
RH 2.0 Map10614.3RGD
SHRSP x BN Map1046.5699RGD
FHH x ACI Map1052.6699RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_infection Congenic strain showed susceptibility to infection from Toxoplasma gondii. 1578521