Strain Report - Rat Genome Database

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Strain: SS.LEW-(D17Rat65-Prl)/Ayd

Symbol: SS.LEW-(D17Rat65-Prl)/Ayd
Strain: SS.LEW-(D17Rat65-Prl)
Substrain: Ayd
RGD ID: 1559033
Citation ID: RRID:RGD_1559033
Ontology ID: RS:0001495
Also known as: C17S.L1; SS.LEW-(D17Rat65-Prl)/Ayd
Type: congenic
Source: Research Centre, Centre Hosp Univ Montreal, Quebec, Canada
Origin: This congenic strain contains a LEW/Crlc chromosome 17 segment transferred to the SS/Jr recipient strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21737,859,999 - 82,479,847RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01739,814,236 - 86,731,080RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01741,720,751 - 88,435,496RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41744,699,101 - 93,930,006RGD_MAPPER_PIPELINERGSC3.4






Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mean arterial blood pressure

References

References - curated
1. Grondin M, etal., Physiol Genomics 2005 Mar 21;21(1):112-6. Epub 2005 Jan 4.
2. RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D17Rat65)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21782,479,461 - 82,479,847 (+)MAPPER
Rnor_6.01786,730,695 - 86,731,080NCBI
Rnor_5.01788,435,111 - 88,435,496UniSTS
RGSC_v3.41793,929,621 - 93,930,006UniSTS
RGSC_v3.11793,940,453 - 93,940,839RGD
Celera1781,749,932 - 81,750,317UniSTS
RH 3.4 Map17835.8UniSTS
RH 3.4 Map17835.8RGD
RH 2.0 Map17694.9RGD
SHRSP x BN Map1747.5399RGD
FHH x ACI Map1765.42RGD

Flank 2 / 1 (Prl)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21737,859,999 - 37,870,062 (-)NCBI
mRatBN7.2 Ensembl1737,860,007 - 37,870,062 (-)Ensembl
Rnor_6.01739,814,236 - 39,824,299 (-)NCBI
Rnor_6.0 Ensembl1739,814,244 - 39,824,299 (-)Ensembl
Rnor_5.01741,720,751 - 41,730,813 (-)NCBI
RGSC_v3.41744,699,101 - 44,709,162 (-)NCBI
RGSC_v3.11744,701,945 - 44,712,003 (-)NCBI
Celera1737,551,071 - 37,561,021 (-)NCBI
Cytogenetic Map17p12NCBI
Strain QTL Data
Symbol Name Trait
Bp278 Blood pressure QTL 278 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem blood pressure is lower than that of parental strain SS/Jr 1547847