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Strain Registration

Strain: SS-Chr 3BN.SS-(D3Rat222-D3Rat218).Il2rgem1/Mcwi

Symbol: SS-Chr 3BN.SS-(D3Rat222-D3Rat218).Il2rgem1/Mcwi
Strain: SS-Chr 3BN.SS-(D3Rat222-D3Rat218).Il2rgem1
Substrain: Mcwi
RGD ID: 155791433
Citation ID: RRID:RGD_155791433
Ontology ID: RS:0005351
Alleles: Il2rgem1Mcwi
Also Known As: Immunodeficient jq congenic line; SS-Chr 3BN.SS-(D3Rat222-D3Rat218)-Il2rgem1Mcwi/Mcwi; SS-Chr 3^[BN].SS-(D3Rat222-D3Rat218).Il2rg^[em1]/Mcwi
Type: congenic
Available Source: Contact MCW rat distribution at mcwcustomrats@mcw.edu for availability.
Origination: This strain was submitted by Dr. Amit Joshi Medical College of Wisconsin.
Description: Immunodeficient congenic line developed by intercross of SS-Chr3BN.SS-(D3Rat222-D3Rat218)/Mcwi(RGD:155782881) withSS-Il2rgem1Mcwi (RGD:12790632) to breed the Il2rg (X-SCID) mutation into this background.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8399,740,665 - 145,746,396RGD_MAPPER_PIPELINE
mRatBN7.2379,285,268 - 125,293,758RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0382,222,060 - 131,051,652RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.0388,924,451 - 137,527,624RGD_MAPPER_PIPELINERnor_5.0
RGSC_v3.4377,727,907 - 126,079,458RGD_MAPPER_PIPELINERGSC_v3.4






References

Region

Position Markers

Flank 1 / 1 (D3Rat222)
Rat AssemblyChrPosition (strand)Source
GRCr8399,740,665 - 99,740,794 (+)Marker Load Pipeline
mRatBN7.2379,285,268 - 79,285,397 (+)MAPPER
Rnor_6.0382,222,060 - 82,222,188NCBI
Rnor_6.0384,243,073 - 84,243,201NCBI
Rnor_5.0390,945,643 - 90,945,771UniSTS
Rnor_5.0388,924,451 - 88,924,579UniSTS
RGSC_v3.4377,727,908 - 77,728,036UniSTS
RGSC_v3.4377,727,907 - 77,728,035RGD
Celera378,488,221 - 78,488,349UniSTS
RGSC_v3.1377,624,335 - 77,624,463RGD
SHRSP x BN Map342.7898UniSTS
SHRSP x BN Map342.7898RGD
Cytogenetic Map3q24UniSTS

Flank 2 / 1 (D3Rat218)
Rat AssemblyChrPosition (strand)Source
GRCr83145,746,177 - 145,746,396 (+)Marker Load Pipeline
mRatBN7.23125,293,539 - 125,293,758 (-)MAPPER
Rnor_6.03131,051,434 - 131,051,652NCBI
Rnor_5.03137,527,406 - 137,527,624UniSTS
RGSC_v3.43126,079,240 - 126,079,458UniSTS
RGSC_v3.43126,079,239 - 126,079,458RGD
Celera3124,004,473 - 124,004,691UniSTS
RGSC_v3.13125,984,812 - 125,985,031RGD
SHRSP x BN Map362.4899RGD
SHRSP x BN Map362.4899UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-30 SS-Chr 3BN.SS-(D3Rat222-D3Rat218).Il2rgem1/Mcwi    SS-Chr 3BN.SS-(D3Rat222-D3Rat218)-Il2rgem1/Mcwi    Symbol and/or name change 68913 APPROVED
2022-12-19 SS-Chr 3BN.SS-(D3Rat222-D3Rat218)-Il2rgem1/Mcwi    SS-Chr 3BN.SS-(D3Rat222-D3Rat218)-Il2rgem1Mcwi/Mcwi    Symbol and/or name change 68913 APPROVED
2022-12-15 SS-Chr 3BN.SS-(D3Rat222-D3Rat218)-Il2rgem1Mcwi/Mcwi    SS-Chr 3BN.SS-(D3Rat222-D3Rat218)-Il2rgem1Mcwi/Mcwi    Symbol and/or name change 68913 APPROVED