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Strain Registration

Strain: SS.SHR-(D2Rat46- D2Mco48)/Mco

Symbol: SS.SHR-(D2Rat46- D2Mco48)/Mco
Strain: SS.SHR-(D2Rat46- D2Mco48)
Substrain: Mco
RGD ID: 150517549
Citation ID: RRID:RGD_150517549
Ontology ID: RS:0005068
Also Known As: S.SHR(2)X39; SS.SHR-(D2Rat46- D2Mco48)/Mco
Type: congenic
Available Source: Not Available
Origination: University of Toledo Toledo, Ohio
Description: This SS congenic carries the chromosomal fragment from the spontaneously hypertensive rat (SHR). Recombinant Progeny Testing (RPT) was used to fine-map the proteinuria locus. The congenic was developed from the recombinant families by fixing the transferred genomic interval (D2Rat46- D2Mco48) in the homozygous SHR/SHR state
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22168,559,501 - 168,559,667RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02182,194,909 - 182,195,074RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02201,609,408 - 201,609,573RGD_MAPPER_PIPELINERnor5.0
Rnor_5.02034,115,408 - 34,116,469RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42174,932,771 - 190,428,097RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.42029,853,888 - 29,855,558RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Genetic variants in Arhgef11 are associated with kidney injury in the Dahl salt-sensitive rat. Williams JM, etal., Hypertension. 2012 Nov;60(5):1157-68. doi: 10.1161/HYPERTENSIONAHA.112.199240. Epub 2012 Sep 17.

Region

Position Markers

Flank 1 / 1 (D2Rat46)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22168,559,501 - 168,559,667 (+)MAPPER
Rnor_6.02182,194,909 - 182,195,074NCBI
Rnor_5.02201,609,408 - 201,609,573UniSTS
RGSC_v3.42174,932,771 - 174,933,276RGD
RGSC_v3.42174,932,805 - 174,932,970UniSTS
RGSC_v3.12174,882,911 - 174,883,076RGD
Celera2162,579,013 - 162,579,178UniSTS
RH 3.4 Map21094.5UniSTS
RH 3.4 Map21094.5RGD
FHH x ACI Map275.4999UniSTS
FHH x ACI Map275.4999RGD
Cytogenetic Map2q34UniSTS

Flank 2 / 1 (D2Mco48)
Rat AssemblyChrPosition (strand)Source
Rnor_5.02034,115,408 - 34,116,469NCBI
RGSC_v3.42029,853,888 - 29,855,558UniSTS
RGSC_v3.42190,427,909 - 190,428,097UniSTS
Celera840,643,459 - 40,644,632UniSTS
Celera2175,624,598 - 175,624,786UniSTS
Cytogenetic Map2q34UniSTS

Additional Information