Strain Report - Rat Genome Database

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Strain: MWF.SHR-(D6Rat1-D6Rat81)/Rkb

Symbol: MWF.SHR-(D6Rat1-D6Rat81)/Rkb
Strain: MWF.SHR-(D6Rat1-D6Rat81)
Substrain: Rkb
RGD ID: 150429606
Citation ID: RRID:RGD_150429606
Ontology ID: RS:0005049
Also Known As: MWF.SHR-(D6Rat1-D6Rat81)/Rkb
Type: congenic
Available Source: Not Available
Origination: Freie Universitdt Berlin, Berlin, Germany
Description: The congenic MWF.SHR-(D6Rat1-D6Rat81)/Rkb was generated by transfer of different nested SHR/FubRkb segments onto the MWF/FubRkb background. For this procedure, male and female rats of the MWF-6SHR (RGD:1641831) breeding, that were homozygous for all MWF chromosomes except RNO6 and heterozygous for RNO6, were intercrossed. Eight congenics were generated.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26107,351,142 - 137,801,795RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.06111,715,478 - 144,745,573RGD_MAPPER_PIPELINERnor6.0
Rnor_5.06120,994,890 - 153,672,040RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.46111,967,597 - 144,152,572RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View
Albuminuria  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Analysis of the genomic architecture of a complex trait locus in hypertensive rat models links Tmem63c to kidney damage. Schulz A, etal., Elife. 2019 Mar 22;8. pii: 42068. doi: 10.7554/eLife.42068.

Region

Position Markers

Flank 1 / 1 (D6Rat1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.26137,801,573 - 137,801,795 (+)MAPPER
Rnor_6.06144,745,354 - 144,745,573NCBI
Rnor_5.06153,671,821 - 153,672,040UniSTS
RGSC_v3.46144,152,353 - 144,152,572UniSTS
RGSC_v3.46144,152,352 - 144,152,572RGD
RGSC_v3.16144,158,540 - 144,158,759RGD
Celera6135,457,174 - 135,457,393UniSTS
RH 3.4 Map6924.0RGD
RH 3.4 Map6924.0UniSTS
RH 2.0 Map61203.5RGD
SHRSP x BN Map682.8898RGD
FHH x ACI Map695.64RGD
Cytogenetic Map6q33UniSTS

Flank 2 / 1 (D6Rat81)
Rat AssemblyChrPosition (strand)Source
mRatBN7.26107,351,142 - 107,351,382 (+)MAPPER
Rnor_6.06111,715,478 - 111,715,717NCBI
Rnor_5.06120,994,890 - 120,995,129UniSTS
RGSC_v3.46111,967,598 - 111,967,837UniSTS
RGSC_v3.46111,967,597 - 111,967,837RGD
RGSC_v3.16111,971,129 - 111,971,368RGD
Celera6105,165,742 - 105,165,981UniSTS
RH 3.4 Map6744.5RGD
RH 3.4 Map6744.5UniSTS
RH 2.0 Map6991.2RGD
SHRSP x BN Map665.7398RGD
FHH x ACI Map669.11RGD
Cytogenetic Map6q31UniSTS

Additional Information