Strain Report - Rat Genome Database

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Strain: MWF.SHR-(D6Rat1-D6Rat121)/Rkb

Symbol: MWF.SHR-(D6Rat1-D6Rat121)/Rkb
Strain: MWF.SHR-(D6Rat1-D6Rat121)
Substrain: Rkb
RGD ID: 150429604
Citation ID: RRID:RGD_150429604
Ontology ID: RS:0005047
Also Known As: MWF.SHR-(D6Rat1-D6Rat121)/Rkb
Type: congenic
Available Source: Not Available
Origination: Freie Universitdt Berlin, Berlin, Germany
Description: The congenic MWF.SHR-(D6Rat1-D6Rat121)/Rkb was generated by transfer of different nested SHR/FubRkb segments onto the MWF/FubRkb background. For this procedure, male and female rats of the MWF-6SHR (RGD:1641831) breeding, that were homozygous for all MWF chromosomes except RNO6 and heterozygous for RNO6, were intercrossed. Eight congenics were generated.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2695,760,211 - 137,801,795RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.06100,120,078 - 144,745,573RGD_MAPPER_PIPELINERnor6.0
Rnor_5.06109,506,414 - 153,672,040RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4699,651,951 - 144,152,572RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Analysis of the genomic architecture of a complex trait locus in hypertensive rat models links Tmem63c to kidney damage. Schulz A, etal., Elife. 2019 Mar 22;8. pii: 42068. doi: 10.7554/eLife.42068.

Region

Position Markers

Flank 1 / 1 (D6Rat1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.26137,801,573 - 137,801,795 (+)MAPPER
Rnor_6.06144,745,354 - 144,745,573NCBI
Rnor_5.06153,671,821 - 153,672,040UniSTS
RGSC_v3.46144,152,353 - 144,152,572UniSTS
RGSC_v3.46144,152,352 - 144,152,572RGD
RGSC_v3.16144,158,540 - 144,158,759RGD
Celera6135,457,174 - 135,457,393UniSTS
RH 3.4 Map6924.0RGD
RH 3.4 Map6924.0UniSTS
RH 2.0 Map61203.5RGD
SHRSP x BN Map682.8898RGD
FHH x ACI Map695.64RGD
Cytogenetic Map6q33UniSTS

Flank 2 / 1 (D6Rat121)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2695,760,211 - 95,760,346 (+)MAPPER
Rnor_6.06100,120,078 - 100,120,212NCBI
Rnor_5.06109,506,414 - 109,506,548UniSTS
RGSC_v3.4699,651,951 - 99,652,087RGD
RGSC_v3.4699,651,953 - 99,652,087UniSTS
RGSC_v3.1699,655,407 - 99,655,543RGD
Celera694,176,684 - 94,176,820UniSTS
SHRSP x BN Map657.8199RGD
SHRSP x BN Map657.8199UniSTS
Cytogenetic Map6q24UniSTS

Additional Information