Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: MWF.SHR-(D6Rat1-D6Rat106)/Rkb

Symbol: MWF.SHR-(D6Rat1-D6Rat106)/Rkb
Strain: MWF.SHR-(D6Rat1-D6Rat106)
Substrain: Rkb
RGD ID: 150429602
Citation ID: RRID:RGD_150429602
Ontology ID: RS:0005045
Also Known As: MWF.SHR-(D6Rat1-D6Rat106)/Rkb
Type: congenic
Available Source: Not Available
Origination: Freie Universitdt Berlin, Berlin, Germany
Description: The congenic MWF.SHR-(D6Rat1-D6Rat106)/Rkb was generated by transfer of different nested SHR/FubRkb segments onto the MWF/FubRkb background. For this procedure, male and female rats of the MWF-6SHR (RGD:1641831) breeding, that were homozygous for all MWF chromosomes except RNO6 and heterozygous for RNO6, were intercrossed. Eight congenics were generated.
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2665,531,555 - 137,801,795RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0668,781,170 - 144,745,573RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0678,348,236 - 153,672,040RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4668,036,028 - 144,152,572RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Analysis of the genomic architecture of a complex trait locus in hypertensive rat models links Tmem63c to kidney damage. Schulz A, etal., Elife. 2019 Mar 22;8. pii: 42068. doi: 10.7554/eLife.42068.


Position Markers

Flank 1 / 1 (D6Rat1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.26137,801,573 - 137,801,795 (+)MAPPER
Rnor_6.06144,745,354 - 144,745,573NCBI
Rnor_5.06153,671,821 - 153,672,040UniSTS
RGSC_v3.46144,152,353 - 144,152,572UniSTS
RGSC_v3.46144,152,352 - 144,152,572RGD
RGSC_v3.16144,158,540 - 144,158,759RGD
Celera6135,457,174 - 135,457,393UniSTS
RH 3.4 Map6924.0RGD
RH 3.4 Map6924.0UniSTS
RH 2.0 Map61203.5RGD
SHRSP x BN Map682.8898RGD
FHH x ACI Map695.64RGD
Cytogenetic Map6q33UniSTS

Flank 2 / 1 (D6Rat106)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2665,531,555 - 65,531,697 (+)MAPPER
Rnor_6.0668,781,170 - 68,781,311NCBI
Rnor_5.0678,348,236 - 78,348,377UniSTS
RGSC_v3.4668,036,230 - 68,036,371UniSTS
RGSC_v3.4668,036,028 - 68,036,449RGD
RGSC_v3.1668,039,356 - 68,039,497RGD
Celera664,465,618 - 64,465,760UniSTS
RH 3.4 Map6480.9RGD
RH 3.4 Map6480.9UniSTS
RH 2.0 Map6641.1RGD
SHRSP x BN Map644.2699RGD

Additional Information