Strain Report - Rat Genome Database

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Strain: WKY.SHR-(D2Rat174-D2Rat185)

Symbol: WKY.SHR-(D2Rat174-D2Rat185)
Strain: WKY.SHR-(D2Rat174-D2Rat185)
RGD ID: 1359009
Citation ID: RRID:RGD_1359009
Ontology ID: RS:0001027
Also Known As: 2a;WKY/lj-SHR/lj-2a; WKY.SHR-(D2Rat174-D2Rat185)
Type: congenic
Available Source: Not Available
Origination: Dept Pharmacology, Univ. of California San Diego, La Jolla, CA USA
Description: Congenic strains were constructed by repeated backcross of an (SHR/NCrl x WKY/NCrl)F1 to the WKY/Crl recipient strain with selection for chromosome 2 SHR markers
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2259,744,817 - 229,059,787RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0260,746,052 - 245,893,748RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0283,930,202 - 264,423,808RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4260,124,623 - 238,140,155RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Reciprocal rat chromosome 2 congenic strains reveal contrasting blood pressure and heart rate QTL. Alemayehu A, etal., Physiol Genomics 2002 Sep 3;10(3):199-210.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat174)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2259,744,817 - 59,745,001 (+)MAPPER
Rnor_6.0260,746,052 - 60,746,235NCBI
Rnor_5.0283,930,202 - 83,930,385UniSTS
RGSC_v3.4260,124,623 - 60,124,807RGD
RGSC_v3.4260,124,624 - 60,124,807UniSTS
RGSC_v3.1260,052,788 - 60,053,041RGD
Celera258,929,472 - 58,929,659UniSTS
SHRSP x BN Map227.4798RGD
SHRSP x BN Map227.4798UniSTS

Flank 2 / 1 (D2Rat185)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22229,059,610 - 229,059,787 (+)MAPPER
Rnor_6.02245,893,572 - 245,893,748NCBI
Rnor_5.02264,423,632 - 264,423,808UniSTS
RGSC_v3.42238,139,978 - 238,140,155RGD
RGSC_v3.42238,139,979 - 238,140,155UniSTS
RGSC_v3.12238,126,718 - 238,126,895RGD
Celera2221,149,549 - 221,149,731UniSTS
SHRSP x BN Map297.6898RGD
SHRSP x BN Map297.6898UniSTS

Additional Information