Strain Report - Rat Genome Database

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Strain: WKY.SHR-(D2Rat174-D2Rat62)

Symbol: WKY.SHR-(D2Rat174-D2Rat62)
Strain: WKY.SHR-(D2Rat174-D2Rat62)
RGD ID: 1359007
Citation ID: RRID:RGD_1359007
Ontology ID: RS:0001030
Also Known As: 2a-F; WKY.SHR-(D2Rat174-D2Rat62)
Type: congenic
Available Source: Not Available
Origination: Dept Pharmacology, Univ. of California San Diego, La Jolla, CA USA
Description: This congenic substrain was contructed by repeated backcrossing of congenic strain WKY.SHR-(D2Rat174-D2Rat185)/NCrl to parental strain WKY/NCrl
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2259,744,817 - 219,753,474RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0260,746,052 - 236,318,668RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0283,930,202 - 254,867,363RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4260,124,623 - 228,664,122RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Reciprocal rat chromosome 2 congenic strains reveal contrasting blood pressure and heart rate QTL. Alemayehu A, etal., Physiol Genomics 2002 Sep 3;10(3):199-210.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat174)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2259,744,817 - 59,745,001 (+)MAPPER
Rnor_6.0260,746,052 - 60,746,235NCBI
Rnor_5.0283,930,202 - 83,930,385UniSTS
RGSC_v3.4260,124,623 - 60,124,807RGD
RGSC_v3.4260,124,624 - 60,124,807UniSTS
RGSC_v3.1260,052,788 - 60,053,041RGD
Celera258,929,472 - 58,929,659UniSTS
SHRSP x BN Map227.4798RGD
SHRSP x BN Map227.4798UniSTS

Flank 2 / 1 (D2Rat62)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22219,753,301 - 219,753,474 (+)MAPPER
Rnor_6.02236,318,496 - 236,318,668NCBI
Rnor_5.02254,867,191 - 254,867,363UniSTS
RGSC_v3.42228,663,949 - 228,664,122RGD
RGSC_v3.42228,663,950 - 228,664,122UniSTS
RGSC_v3.12228,650,690 - 228,650,862RGD
Celera2212,009,629 - 212,009,815UniSTS
RH 3.4 Map21548.6RGD
RH 3.4 Map21548.6UniSTS
RH 2.0 Map21101.3RGD
SHRSP x BN Map290.8698RGD
Cytogenetic Map2q34-q45UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 WKY.SHR-(D2Rat174-D2Rat62   WKY.SHR-(D2Rat174-D2Rat62   Name updated 68913 APPROVED