Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: SHR.WKY-(D2Rat15-D2Rat50)

Symbol: SHR.WKY-(D2Rat15-D2Rat50)
Strain: SHR.WKY-(D2Rat15-D2Rat50)
RGD ID: 1359005
Citation ID: RRID:RGD_1359005
Ontology ID: RS:0000734
Also Known As: 2c-J; SHR.WKY-(D2Rat15-D2Rat50)
Type: congenic
Available Source: Not Available
Origination: Dept Pharmacology, Univ. of California San Diego, La Jolla, CA USA
Description: This congenic substrain was constructed by repeated backcrossing the congenic strain SHR.WKY-(D2Rat10-D2Mgh13) to parental strain SHR/NCrl
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2247,137,898 - 192,625,452RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0247,783,949 - 207,612,467RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0266,171,293 - 227,035,367RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4246,251,938 - 200,390,471RGD_MAPPER_PIPELINERGSC3.4

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype


References - curated
# Reference Title Reference Citation
1. Reciprocal rat chromosome 2 congenic strains reveal contrasting blood pressure and heart rate QTL. Alemayehu A, etal., Physiol Genomics 2002 Sep 3;10(3):199-210.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D2Rat15)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2247,137,898 - 47,138,066 (+)MAPPER
Rnor_6.0247,783,949 - 47,784,116NCBI
Rnor_5.0266,171,293 - 66,171,460UniSTS
RGSC_v3.4246,251,939 - 46,252,106UniSTS
RGSC_v3.4246,251,938 - 46,252,106RGD
RGSC_v3.1246,180,171 - 46,180,339RGD
Celera242,872,931 - 42,873,098UniSTS
RH 3.4 Map2313.1RGD
RH 3.4 Map2313.1UniSTS
RH 2.0 Map2281.7RGD
SHRSP x BN Map218.4498RGD
FHH x ACI Map226.3399RGD
Cytogenetic Map2q14UniSTS

Flank 2 / 1 (D2Rat50)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22192,625,307 - 192,625,452 (+)MAPPER
Rnor_6.02207,612,323 - 207,612,467NCBI
Rnor_5.02227,035,223 - 227,035,367UniSTS
RGSC_v3.42200,390,326 - 200,390,471RGD
RGSC_v3.42200,390,327 - 200,390,471UniSTS
RGSC_v3.12200,352,887 - 200,353,226RGD
Celera2185,090,977 - 185,091,121UniSTS
SHRSP x BN Map274.0098UniSTS
SHRSP x BN Map274.0098RGD

Additional Information

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 SHR.WKY-(D2Rat15-D2Rat50   SHR.WKY-(D2Rat15-D2Rat50   Name updated 68913 APPROVED
2013-08-28 SHR.WKY-(D2Rat15-D2Rat50   SHR.WKY-(D2Rat15-D2Rat50   Name updated 68913 APPROVED