Strain Report - Rat Genome Database

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Strain: WKY.SHR-(D2Rat241-D2Rat185)

Symbol: WKY.SHR-(D2Rat241-D2Rat185)
Strain: WKY.SHR-(D2Rat241-D2Rat185)
RGD ID: 1358997
Citation ID: RRID:RGD_1358997
Ontology ID: RS:0001031
Also Known As: 2a-D; WKY.SHR-(D2Rat241-D2Rat185)
Type: congenic
Available Source: Not Available
Origination: Dept Pharmacology, Univ. of California San Diego, La Jolla, CA USA
Description: This congenic substrain was contructed by repeated backcrossing of congenic strain WKY.SHR-(D2Rat174-D2Rat185)/NCrl to parental strain WKY/NCrl
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22229,059,610 - 229,059,787RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02245,893,572 - 245,893,748RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02242,993,235 - 264,423,808RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42217,985,399 - 238,140,155RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Reciprocal rat chromosome 2 congenic strains reveal contrasting blood pressure and heart rate QTL. Alemayehu A, etal., Physiol Genomics 2002 Sep 3;10(3):199-210.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat241)
Rat AssemblyChrPosition (strand)Source
Rnor_5.02242,993,235 - 242,993,417UniSTS
RGSC_v3.42217,985,399 - 217,985,582RGD
RGSC_v3.42217,985,400 - 217,985,582UniSTS
RGSC_v3.12217,948,461 - 217,948,644RGD
Celera2201,894,232 - 201,894,414UniSTS
SHRSP x BN Map283.0098UniSTS
SHRSP x BN Map283.0098RGD
Cytogenetic Map2 RGD

Flank 2 / 1 (D2Rat185)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22229,059,610 - 229,059,787 (+)MAPPER
Rnor_6.02245,893,572 - 245,893,748NCBI
Rnor_5.02264,423,632 - 264,423,808UniSTS
RGSC_v3.42238,139,978 - 238,140,155RGD
RGSC_v3.42238,139,979 - 238,140,155UniSTS
RGSC_v3.12238,126,718 - 238,126,895RGD
Celera2221,149,549 - 221,149,731UniSTS
SHRSP x BN Map297.6898RGD
SHRSP x BN Map297.6898UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 WKY.SHR-(D2Rat241-D2Rat185   WKY.SHR-(D2Rat241-D2Rat185   Name updated 68913 APPROVED
2013-08-28 WKY.SHR-(D2Rat241-D2Rat185   WKY.SHR-(D2Rat241-D2Rat185   Name updated 68913 APPROVED