Strain Report - Rat Genome Database

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Strain: SHR.WKY-(D2Rat10-D2Mgh13)

Symbol: SHR.WKY-(D2Rat10-D2Mgh13)
Strain: SHR.WKY-(D2Rat10-D2Mgh13)
RGD ID: 1358996
Citation ID: RRID:RGD_1358996
Ontology ID: RS:0000733
Also Known As: 2c;SHR/lj-WKY/lj-2c; SHR.WKY-(D2Rat10-D2Mgh13)
Type: congenic
Available Source: Not Available
Origination: Dept Pharmacology, Univ. of California San Diego, La Jolla, CA USA
Description: This congenic strain carries a WKY/NCrl chromosome 2 segment transferred to a SHR/NCrl background
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2236,023,184 - 235,501,121RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0234,967,269 - 252,466,565RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0254,092,967 - 270,992,875RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4235,874,553 - 244,809,764RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Reciprocal rat chromosome 2 congenic strains reveal contrasting blood pressure and heart rate QTL. Alemayehu A, etal., Physiol Genomics 2002 Sep 3;10(3):199-210.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2236,023,184 - 36,023,379 (+)MAPPER
Rnor_6.0234,967,269 - 34,967,461NCBI
Rnor_5.0254,092,967 - 54,093,159UniSTS
RGSC_v3.4235,874,553 - 35,874,746RGD
RGSC_v3.4235,874,554 - 35,874,746UniSTS
RGSC_v3.1235,794,923 - 35,795,115RGD
Celera231,979,553 - 31,979,726UniSTS
RH 3.4 Map2148.7UniSTS
RH 3.4 Map2148.7RGD
RH 2.0 Map2219.6RGD
SHRSP x BN Map215.0498RGD
FHH x ACI Map223.0699RGD

Flank 2 / 1 (D2Mgh13)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22235,500,980 - 235,501,121 (+)MAPPER
Rnor_6.02252,466,425 - 252,466,565NCBI
Rnor_5.02270,992,735 - 270,992,875UniSTS
RGSC_v3.42244,809,623 - 244,809,764RGD
RGSC_v3.42244,809,624 - 244,809,764UniSTS
RGSC_v3.12244,796,363 - 244,796,504RGD
Celera2227,479,263 - 227,479,403UniSTS
SHRSP x BN Map2101.1198RGD
SHRSP x BN Map2101.1198UniSTS
Cytogenetic Map2q44UniSTS

Additional Information