Strain Report - Rat Genome Database

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Strain: SHR.WKY-(D2Rat161-D2Rat241)

Symbol: SHR.WKY-(D2Rat161-D2Rat241)
Strain: SHR.WKY-(D2Rat161-D2Rat241)
RGD ID: 1358994
Citation ID: RRID:RGD_1358994
Ontology ID: RS:0000735
Also Known As: 2c-I; SHR.WKY-(D2Rat161-D2Rat241)
Type: congenic
Available Source: Not Available
Origination: Dept Pharmacology, Univ. of California San Diego, La Jolla, CA USA
Description: This congenic substrain was constructed by repeated backcrossing the congenic strain SHR.WKY-(D2Rat10-D2Mgh13) congenic strain to the parental strain SHR/NCrl
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22114,837,527 - 114,837,675RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02118,446,646 - 118,446,793RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02138,120,195 - 242,993,417RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42118,264,490 - 217,985,582RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Reciprocal rat chromosome 2 congenic strains reveal contrasting blood pressure and heart rate QTL. Alemayehu A, etal., Physiol Genomics 2002 Sep 3;10(3):199-210.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat161)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22114,837,527 - 114,837,675 (+)MAPPER
Rnor_6.02118,446,646 - 118,446,793NCBI
Rnor_5.02138,120,195 - 138,120,342UniSTS
RGSC_v3.42118,264,503 - 118,264,650UniSTS
RGSC_v3.42118,264,490 - 118,264,840RGD
RGSC_v3.12118,209,465 - 118,209,612RGD
Celera2109,950,883 - 109,951,030UniSTS
RH 3.4 Map2690.5RGD
RH 3.4 Map2690.5UniSTS
SHRSP x BN Map242.2598UniSTS
SHRSP x BN Map242.2598RGD
FHH x ACI Map254.4399RGD

Flank 2 / 1 (D2Rat241)
Rat AssemblyChrPosition (strand)Source
Rnor_5.02242,993,235 - 242,993,417UniSTS
RGSC_v3.42217,985,399 - 217,985,582RGD
RGSC_v3.42217,985,400 - 217,985,582UniSTS
RGSC_v3.12217,948,461 - 217,948,644RGD
Celera2201,894,232 - 201,894,414UniSTS
SHRSP x BN Map283.0098UniSTS
SHRSP x BN Map283.0098RGD
Cytogenetic Map2 RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 SHR.WKY-(D2Rat161-D2Rat241   SHR.WKY-(D2Rat161-D2Rat241   Name updated 68913 APPROVED