Strain Report - Rat Genome Database

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Strain: WKY.SHR-(D2Rat161-D2Rat185)

Symbol: WKY.SHR-(D2Rat161-D2Rat185)
Strain: WKY.SHR-(D2Rat161-D2Rat185)
RGD ID: 1358993
Citation ID: RRID:RGD_1358993
Ontology ID: RS:0001028
Previously known as: 2a-C; WKY.SHR-(D2Rat161-D2Rat185)
Type: congenic
Source: Dept Pharmacology, Univ. of California San Diego, La Jolla, CA USA
Origin: This congenic substrain was contructed by repeated backcrossing of congenic strain WKY.SHR-(D2Rat174-D2Rat185) to parental strain WKY/NCrl
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22114,837,527 - 229,059,787RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02118,446,646 - 245,893,748RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02138,120,195 - 264,423,808RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42118,264,490 - 238,140,155RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Reciprocal rat chromosome 2 congenic strains reveal contrasting blood pressure and heart rate QTL. Alemayehu A, etal., Physiol Genomics 2002 Sep 3;10(3):199-210.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D2Rat161)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22114,837,527 - 114,837,675 (+)MAPPER
Rnor_6.02118,446,646 - 118,446,793NCBI
Rnor_5.02138,120,195 - 138,120,342UniSTS
RGSC_v3.42118,264,503 - 118,264,650UniSTS
RGSC_v3.42118,264,490 - 118,264,840RGD
RGSC_v3.12118,209,465 - 118,209,612RGD
Celera2109,950,883 - 109,951,030UniSTS
RH 3.4 Map2690.5RGD
RH 3.4 Map2690.5UniSTS
SHRSP x BN Map242.2598UniSTS
SHRSP x BN Map242.2598RGD
FHH x ACI Map254.4399RGD

Flank 2 / 1 (D2Rat185)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22229,059,610 - 229,059,787 (+)MAPPER
Rnor_6.02245,893,572 - 245,893,748NCBI
Rnor_5.02264,423,632 - 264,423,808UniSTS
RGSC_v3.42238,139,978 - 238,140,155RGD
RGSC_v3.42238,139,979 - 238,140,155UniSTS
RGSC_v3.12238,126,718 - 238,126,895RGD
Celera2221,149,549 - 221,149,731UniSTS
SHRSP x BN Map297.6898RGD
SHRSP x BN Map297.6898UniSTS

Additional Information

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 WKY.SHR-(D2Rat161-D2Rat185   WKY.SHR-(D2Rat161-D2Rat185   Name updated 68913 APPROVED