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Strain: SS.MNS-(D2Chm25-Fgg)/Ayd

Symbol: SS.MNS-(D2Chm25-Fgg)/Ayd
Strain: SS.MNS-(D2Chm25-Fgg)
Substrain: Ayd
RGD ID: 1358172
Citation ID: RRID:RGD_1358172
Ontology ID: RS:0000900
Also Known As: C2S.M12; SS.MNS-(D2Chm25-Fgg)/Ayd; DSS.MNS-(D2Chm25-Fgg)/Lt
Type: congenic
Available Source: Not Available
Origination: Centre Hospitalier de L'Universite de Montreal (CHUM), Montreal, Quebec,Canada
Description: Congenic strain was created by backcrossing congenic strain SS.MNS-(D2Mit6-Adh1)/Lt strain into the parental Dahl Salt-sensitive (SS) strain.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22166,144,095 - 168,362,325RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02179,779,225 - 181,994,523RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02199,188,066 - 201,409,143RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42172,459,883 - 174,734,594RGD_MAPPER_PIPELINERGSC3.4





Experimental Data Annotations    Click to see Annotation Detail View

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
SS.MNS-(D2Chm25-Fgg)/Ayd  IEA 7241799 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
aorta mass  EXP 1599557 RGD 
body mass  EXP 1599557 RGD 
heart left ventricle mass  EXP 1599557 RGD 
heart mass  EXP 1599557 RGD 
heart right ventricle mass  EXP 1599557 RGD 
kidney mass  EXP 1599557 RGD 

References

References - curated
# Reference Title Reference Citation
1. Distinct quantitative trait loci for kidney, cardiac, and aortic mass dissociated from and associated with blood pressure in Dahl congenic rats. Duong C, etal., Mamm Genome. 2006 Dec;17(12):1147-61. Epub 2006 Dec 1.
2. Multiple quantitative trait loci for blood pressure interacting epistatically and additively on dahl rat chromosome 2. Dutil J, etal., Hypertension 2005 Apr;45(4):557-64. Epub 2005 Feb 28.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 2 / 1 (D2Chm25)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22166,144,095 - 166,144,339 (+)MAPPER
Rnor_6.02179,779,225 - 179,779,468NCBI
Rnor_5.02199,188,066 - 199,188,309UniSTS
RGSC_v3.42172,459,883 - 172,460,126UniSTS
Celera2160,184,548 - 160,184,782UniSTS
Cytogenetic Map2q33UniSTS

Flank 1 / 1 (Fgg)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22168,354,880 - 168,362,325 (+)NCBI
mRatBN7.2 Ensembl2168,355,013 - 168,362,322 (+)Ensembl
UTH_Rnor_SHR_Utx2175,545,169 - 175,552,469 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.02173,566,102 - 173,573,404 (+)NCBI
UTH_Rnor_WKY_Bbb_1.02168,167,520 - 168,174,818 (+)NCBI
Rnor_6.02181,987,080 - 181,994,523 (+)NCBI
Rnor_6.0 Ensembl2181,987,217 - 181,994,514 (+)Ensembl
Rnor_5.02201,401,700 - 201,409,143 (+)NCBI
RGSC_v3.42174,727,312 - 174,734,594 (+)NCBI
RGSC_v3.12174,677,417 - 174,684,698 (+)NCBI
Celera2162,381,731 - 162,389,018 (+)NCBI
Cytogenetic Map2q34NCBI
Strain QTL Data
Symbol Name Trait
Am4 Aortic mass QTL 4 aorta mass   (VT:0002845)    
Bw176 Body weight QTL 176 body mass   (VT:0001259)    
Cm67 Cardiac mass QTL 67 heart mass   (VT:0007028)    
Cm89 Cardiac mass QTL 89 heart left ventricle mass   (VT:0007031)    
Cm90 Cardiac mass QTL 90 heart right ventricle mass   (VT:0007033)    
Kidm56 Kidney mass QTL 56 kidney mass   (VT:0002707)    

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-11-26 SS.MNS-(D2Chm25-Fgg)/Ayd    SS.MNS-(D2Chm25-Fgg)/Ayd    Name updated 68913 APPROVED
2013-11-26 SS.MNS-(D2Chm25-Fgg)/Ayd    SS.MNS-(D2Chm25-Fgg)/Ayd    Name updated 68913 APPROVED