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Strain Registration

Strain: SS.MNS-(D2Rat183-D2Chm113)/Ayd

Symbol: SS.MNS-(D2Rat183-D2Chm113)/Ayd
Strain: SS.MNS-(D2Rat183-D2Chm113)
Substrain: Ayd
RGD ID: 1358156
Citation ID: RRID:RGD_1358156
Ontology ID: RS:0000904
Previously known as: SS.MNS-(D2Rat183-D2Chm113)/Ayd; C2S.M7; SS.MNS-(D2Chm161-D2Chm408)/Ayd; SS.MNS-(D2Chm161-D2Chm408)/Ayd; SS.MNS-(D2Chm33-Tm2sf1)/Ayd; SS.MNS-(D2Chm33-Tm2sf1)/Ayd; DSS.MNS-(D2Rat183-D2Chm113)/Lt; SS.MNS-(D2Chm33-D2Chm90)/Ayd
Type: congenic
Source: Centre Hospitalier de L'Universite de Montreal (CHUM), Montreal, Quebec,Canada
Origin: Congenic strain was created by backcrossing congenic strain SS.MNS-(D2Mit6-D2Rat166)/Lt strain into the parental Dahl Salt-sensitive (SS) strain.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22139,096,736 - 140,708,949RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02144,313,532 - 145,975,996RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02163,731,761 - 165,386,311RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42144,136,724 - 145,774,334RGD_MAPPER_PIPELINERGSC3.4





References

References - curated
# Reference Title Reference Citation
1. Modularization and epistatic hierarchy determine homeostatic actions of multiple blood pressure quantitative trait loci. Chauvet C, etal., Hum Mol Genet. 2013 Nov 15;22(22):4451-9. doi: 10.1093/hmg/ddt294. Epub 2013 Jun 28.
2. Cardiac pathways distinguish two epistatic modules enacting BP quantitative trait loci and candidate gene analysis. Chauvet C, etal., Hypertens Res. 2009 Jul;32(7):631-7. doi: 10.1038/hr.2009.70. Epub 2009 May 22.
3. Distinct quantitative trait loci for kidney, cardiac, and aortic mass dissociated from and associated with blood pressure in Dahl congenic rats. Duong C, etal., Mamm Genome. 2006 Dec;17(12):1147-61. Epub 2006 Dec 1.
4. Multiple quantitative trait loci for blood pressure interacting epistatically and additively on dahl rat chromosome 2. Dutil J, etal., Hypertension 2005 Apr;45(4):557-64. Epub 2005 Feb 28.
5. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat183)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22139,096,736 - 139,096,945 (+)MAPPER
Rnor_6.02144,313,532 - 144,313,740NCBI
Rnor_5.02163,731,761 - 163,731,969UniSTS
RGSC_v3.42144,136,724 - 144,136,933RGD
RGSC_v3.42144,136,725 - 144,136,933UniSTS
RGSC_v3.12144,086,687 - 144,086,896RGD
Celera2133,580,714 - 133,580,900UniSTS
RH 3.4 Map11381.2RGD
RH 3.4 Map11381.2UniSTS
RH 2.0 Map11153.5RGD
FHH x ACI Map263.3399RGD
Cytogenetic Map2q26UniSTS

Flank 2 / 1 (D2Chm113)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22140,708,701 - 140,708,949 (+)MAPPER
Rnor_6.02145,975,749 - 145,975,996NCBI
Rnor_5.02165,386,064 - 165,386,311UniSTS
RGSC_v3.42145,774,087 - 145,774,334UniSTS
Celera2135,178,678 - 135,178,925UniSTS
Cytogenetic Map2 RGD
Strain QTL Data
Symbol Name Trait
Am1 Aortic mass QTL 1 aorta mass   (VT:0002845)    
Bp256 Blood pressure QTL 256 arterial blood pressure trait   (VT:2000000)    
Bp367 Blood pressure QTL 367 arterial blood pressure trait   (VT:2000000)    
Bw178 Body weight QTL 178 body mass   (VT:0001259)    
Cm82 Cardiac mass QTL 82 heart mass   (VT:0007028)    
Cm83 Cardiac mass QTL 83 heart left ventricle mass   (VT:0007031)    
Cm84 Cardiac mass QTL 84 heart right ventricle mass   (VT:0007033)    
Kidm60 Kidney mass QTL 60 kidney mass   (VT:0002707)    

Additional Information