Strain Report - Rat Genome Database

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Strain: SS.MNS-(D2Mit6-D2Rat166)/Ayd

Symbol: SS.MNS-(D2Mit6-D2Rat166)/Ayd
Strain: SS.MNS-(D2Mit6-D2Rat166)
Substrain: Ayd
RGD ID: 1357984
Citation ID: RRID:RGD_1357984
Ontology ID: RS:0000901
Previously known as: C2S.M1; S.M1; SS.MNS-(D2Mit6-D2Rat166)/Ayd
Type: congenic
Source: Centre Hospitalier de L'Universite de Montreal (CHUM), Montreal, Quebec,Canada
Origin: Congenic strain was created by backcrossing congenic strain SS.MNS-(D2Mit6-Adh1)/Lt strain into the parental Dahl Salt-sensitive (SS) strain
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2276,539,322 - 140,636,154RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0278,321,410 - 145,903,673RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0298,037,122 - 165,313,939RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4277,630,629 - 145,701,148RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Multiple quantitative trait loci for blood pressure interacting epistatically and additively on dahl rat chromosome 2. Dutil J, etal., Hypertension 2005 Apr;45(4):557-64. Epub 2005 Feb 28.
2. A quantitative trait locus for aortic smooth muscle cell number acting independently of blood pressure: implicating the angiotensin receptor AT1B gene as a candidate. Dutil J, etal., Physiol Genomics 2005 Mar 1;.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D2Mit6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2276,539,322 - 76,539,510 (+)MAPPER
Rnor_6.0278,466,075 - 78,466,260RGD
Rnor_6.0278,321,410 - 78,321,595RGD
Rnor_5.0298,153,283 - 98,153,468RGD
Rnor_5.0298,037,122 - 98,037,307RGD
RGSC_v3.4277,630,629 - 77,630,814UniSTS
RGSC_v3.1277,561,812 - 77,562,125RGD
Celera272,243,967 - 72,244,152UniSTS
RH 3.4 Map2500.7RGD
RH 3.4 Map2500.7UniSTS
RH 2.0 Map2406.8RGD
SHRSP x BN Map229.4498RGD
Cytogenetic Map2 RGD

Flank 2 / 1 (D2Rat166)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22140,636,016 - 140,636,154 (+)MAPPER
Rnor_6.02145,903,536 - 145,903,673NCBI
Rnor_5.02165,313,802 - 165,313,939UniSTS
RGSC_v3.42145,701,010 - 145,701,148RGD
RGSC_v3.42145,701,011 - 145,701,148UniSTS
RGSC_v3.12145,650,973 - 145,651,111RGD
Celera2135,106,776 - 135,106,913UniSTS
SHRSP x BN Map258.3298UniSTS
SHRSP x BN Map258.3298RGD
FHH x ACI Map263.3399RGD

Additional Information