Strain Report - Rat Genome Database

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Strain: BN.GK-(D8Rat29-D8Got130)/Ox

Symbol: BN.GK-(D8Rat29-D8Got130)/Ox
Strain: BN.GK-(D8Rat29-D8Got130)
Substrain: Ox
RGD ID: 1331813
Citation ID: RRID:RGD_1331813
Ontology ID: RS:0000119
Also Known As: BN.GK-(D8Rat29-D8Got130); BN.GK-(D8Rat29-D8Got130)/Ox
Type: congenic
Available Source: Not Available
Origination: Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK
Description: This congenic strain contains the Nidd/gk5 locus transferred onto the BN background. GK rats are from a colony in Paris (CNRS) obtained in 1995. BN rats were initially obtained from Charles River Laboratories, Margate, UK.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2882,872,062 - 82,872,307RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0889,482,236 - 89,482,480RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0876,345,502 - 89,012,772RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4874,769,551 - 87,069,779RGD_MAPPER_PIPELINERGSC3.4





References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Enhanced insulin secretion and cholesterol metabolism in congenic strains of the spontaneously diabetic (Type 2) Goto Kakizaki rat are controlled by independent genetic loci in rat chromosome 8. Wallis RH, etal., Diabetologia 2004 Jun;47(6):1096-106. Epub 2004 May 26.

Region

Position Markers

Flank 1 / 1 (D8Rat29)
Rat AssemblyChrPosition (strand)Source
Rnor_5.0876,345,502 - 76,345,678NCBI
RGSC_v3.4874,769,551 - 74,769,726RGD
RGSC_v3.1874,788,605 - 74,788,780RGD
RH 2.0 Map8679.5RGD
SHRSP x BN Map844.83RGD
FHH x ACI Map851.31RGD

Flank 2 / 1 (D8Got130)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2882,872,062 - 82,872,307 (+)MAPPER
Rnor_6.0889,482,236 - 89,482,480NCBI
Rnor_5.0889,012,528 - 89,012,772UniSTS
RGSC_v3.4887,069,534 - 87,069,779RGD
RGSC_v3.4887,069,535 - 87,069,779UniSTS
RGSC_v3.1887,088,990 - 87,089,234RGD
Celera882,556,521 - 82,556,758UniSTS
RH 3.4 Map8956.1UniSTS
RH 3.4 Map8956.1RGD
RH 2.0 Map8776.5RGD
Cytogenetic Map8q31UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-09-24 BN.GK-(D8Rat29-D8Got130)/Ox    BN.GK-(D8Rat29-D8Got130   Symbol updated 68687 APPROVED
2010-09-24 BN.GK-(D8Rat29-D8Got130)/Ox    BN.GK-(D8Rat29-D8Got130   Name updated 68913 APPROVED
2010-09-24 BN.GK-(D8Rat29-D8Got130)/Ox    BN.GK-(D8Rat29-D8Got130   Symbol updated 68687 APPROVED
2010-09-24 BN.GK-(D8Rat29-D8Got130)/Ox    BN.GK-(D8Rat29-D8Got130   Name updated 68913 APPROVED