Strain Report - Rat Genome Database

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Strain: SS.BN-(D13Rat25-RN34_13048990782)/Mcwi

Symbol: SS.BN-(D13Rat25-RN34_13048990782)/Mcwi
Strain: SS.BN-(D13Rat25-RN34_13048990782)
Substrain: Mcwi
RGD ID: 12802362
Citation ID: RRID:RGD_12802362
Ontology ID: RS:0004399
Previously known as: Line 9C; SS.BN-9C; SS.BN-(D13Rat25-RN34_13048990782)/Mcwi
Type: congenic
Source: Medical College of Wisconsin, Milwaukee, Wisconsin
Origin: SS/JrHsdMcwi were crossed with SS-13BN(D13Rat123-D13Rat101)/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21345,049,404 - 45,049,579RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01350,260,357 - 50,260,531RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01355,314,020 - 55,314,194RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41346,520,126 - 48,990,782RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. Congenic mapping and sequence analysis of the Renin locus. Flister MJ, etal., Hypertension. 2013 Apr;61(4):850-6. doi: 10.1161/HYPERTENSIONAHA.111.01008. Epub 2013 Mar 4.
2. Female-specific hypertension loci on rat chromosome 13. Hoffman MJ, etal., Hypertension. 2013 Sep;62(3):557-63. doi: 10.1161/HYPERTENSIONAHA.113.01708. Epub 2013 Jul 1.


Position Markers

Flank 1 / 1 (RN34_13048990782)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.41348,990,782 - 48,990,782RGD

Flank 2 / 1 (D13Rat25)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21345,049,404 - 45,049,579 (-)MAPPER
Rnor_6.01350,260,357 - 50,260,531NCBI
Rnor_5.01355,314,020 - 55,314,194UniSTS
RGSC_v3.41346,520,765 - 46,520,939UniSTS
RGSC_v3.41346,520,127 - 46,520,301UniSTS
RGSC_v3.41346,520,764 - 46,520,939RGD
RGSC_v3.41346,520,126 - 46,520,301RGD
RGSC_v3.11346,534,808 - 46,534,982RGD
Celera1345,381,673 - 45,381,847UniSTS
RH 3.4 Map13174.3RGD
RH 3.4 Map13174.3UniSTS
RH 2.0 Map13375.1RGD
SHRSP x BN Map1314.7498RGD
FHH x ACI Map1318.23RGD
Cytogenetic Map13q13UniSTS
Strain QTL Data
Symbol Name Trait
Bp395 Blood pressure QTL 395 arterial blood pressure trait   (VT:2000000)    

Additional Information