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Strain Registration

Strain: DA.ACI-(D12Mit2-Gtf2i)/Nsi

Symbol: DA.ACI-(D12Mit2-Gtf2i)/Nsi
Strain: DA.ACI-(D12Mit2-Gtf2i)
Substrain: Nsi
RGD ID: 12790595
Citation ID: RRID:RRRC_00673
Ontology ID: RS:0004363
Also Known As: DA.ACI(Cia25) R12; DA.ACI-(D12Mit2-Gtf2i)/Nsi
Type: congenic
Available Source: Rat Resource and Research Center
Origination: North Shore-Long Island Jewish Research Institute,350 Community Drive - Manhasset, NY 11030.
Description: The strain contains the Cia25 R12 recombinant interval introgressed from ACI into DA/Hsd rats through 13 backcrosses. Heterozygous DA.ACI-(D12Got43-Chr12:27368751)/Nsi [also known as DA.ACI(Cia25) R12] rats were brother-sister mated, and the recombinant strain was maintained in the homozygous state thereafter.
Genetic Status: Homozygous
Coat Color: dark agouti
Last Known Status: Cryopreserved Sperm (as of 2017-02-16)
Research Usage arthritis/autoimmunity studies
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21219,610,870 - 22,476,243RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01222,650,702 - 25,487,970RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01224,662,983 - 27,497,928RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41220,932,559 - 23,545,621RGD_MAPPER_PIPELINERGSC3.4






References

Region

Position Markers

Flank 1 / 1 (D12Mit2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21219,610,870 - 19,611,091 (+)MAPPER
Rnor_6.01222,650,702 - 22,650,918NCBI
Rnor_5.01224,662,983 - 24,663,199UniSTS
RGSC_v3.41220,932,560 - 20,932,776UniSTS
RGSC_v3.41220,932,559 - 20,932,776RGD
RGSC_v3.11220,922,171 - 20,922,388RGD
Celera1221,386,630 - 21,386,846UniSTS
RH 3.4 Map12280.3RGD
RH 3.4 Map12280.3UniSTS
RH 2.0 Map12205.1RGD
SHRSP x BN Map1222.7RGD
FHH x ACI Map129.01RGD
Cytogenetic Map12q11-q12UniSTS

Flank 2 / 1 (Gtf2i)
Rat AssemblyChrPosition (strand)Source
GRCr81228,037,344 - 28,112,677 (+)NCBI
mRatBN7.21222,400,933 - 22,476,243 (+)NCBI
mRatBN7.2 Ensembl1222,401,431 - 22,476,243 (+)Ensembl
UTH_Rnor_SHR_Utx1223,544,441 - 23,619,242 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01224,155,505 - 24,230,339 (+)NCBI
UTH_Rnor_WKY_Bbb_1.01223,221,169 - 23,295,801 (+)NCBI
Rnor_6.01225,410,804 - 25,487,970 (+)NCBI
Rnor_6.0 Ensembl1225,411,207 - 25,488,156 (+)Ensembl
Rnor_5.01227,420,618 - 27,497,928 (+)NCBI
RGSC_v3.41223,470,042 - 23,545,621 (+)NCBI
RGSC_v3.11223,350,478 - 23,408,833 (+)NCBI
Celera1224,164,158 - 24,238,521 (+)NCBI
Cytogenetic Map12q12NCBI

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-02-22 DA.ACI-(D12Mit2-Gtf2i)/Nsi    DA.ACI-(D12Got43-Chr12:27368751)/Nsi    Symbol updated 68687 APPROVED
2017-02-22 DA.ACI-(D12Mit2-Gtf2i)/Nsi    DA.ACI-(D12Got43-Chr12:27368751)/Nsi    Symbol updated 68687 APPROVED

Database Acc Id Source(s)
RRRC RRRC:00673 RGD