Strain Report - Rat Genome Database

Name: WI;WDB- Prdm14 tm1(H2BVenus)Nips
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Strain Registration

General

Strain: WI;WDB-Prdm14^{tm1(H2BVenus)Nips}

Symbol:

WI;WDB-Prdm14^{tm1(H2BVenus)Nips}

Strain:

WI;WDB-Prdm14^{tm1(H2BVenus)}

Substrain:

Nips

RGD ID:

125097491

Citation ID:

RRID:RGD_125097491

Ontology ID:

RS:0004911

Alleles:

Prdm14^{tm1(H2BVenus)Nips}

Previously known as:

WI.WDB-Prdm14^{tm1(H2BVenus)Nips}; WI-Prdm14tm1(H2BVenus)Nips; WI-Prdm14^{tm1(H2BVenus)Nips}; WDB-Prdm14^{tm1(H2BVenus)Nips}; WBD-Prdm14^{tm1(H2BVenus)Nips}

Type:

mutant

Source:

Section of Mammalian Transgenesis, Center for Genetic Analysis of Behavior, National Institute for Physiological Sciences, Okazaki, Aichi 444-8787, JAPAN

Origin:

Targeting vector was designed to replace 1st and 4th exons encoding DNA-binding domain of Prdm14 locus with H2BVenus. The vector was introduced into WDB/Nips-ES1/Nips (RGD ID:10054010) embryonic stem cells by electroporation . Targeted ES cells were injected into Crlj:WI blastocysts to produce chimeric rats. The chimeric rats were crossed with Crlj:WI rats to produce heterozygous founder rats. These rat strains are being maintained by crossing the founder rats with Crlj:WI rats. Homozygous Prdm14 knocked-in rats have the germ cell-deficient phenotype.

Genetic Status:

Heterozygous

Last Known Status:

Live Animals; Cryopreserved Embryo (as of 2021-04-01)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	6,082,163 - 6,092,712	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	5	5,710,076 - 5,730,560	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	5	10,550,222 - 10,570,255	RGD_MAPPER_PIPELINE	Rnor5.0

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Data registered by National Institute for Physiological Sciences, JAPAN	Personal communication between Dr. Masumi Hirabayashi and RGD curators

Region

Additional Information

Nomenclature History

Date	Current Symbol	Previous Symbol	Description	Reference	Status
2023-06-06	WI;WDB-Prdm14^{tm1(H2BVenus)Nips}	WI.WDB-Prdm14^{tm1(H2BVenus)Nips}	Symbol and/or name change	68913	APPROVED
2021-05-25	WI.WDB-Prdm14^{tm1(H2BVenus)Nips}	WDB-Prdm14^{tm1(H2BVenus)Nips}	Symbol and/or name change	68913	APPROVED
2021-05-24	WDB-Prdm14^{tm1(H2BVenus)Nips}	WBD-Prdm14^{tm1(H2BVenus)Nips}	Symbol and/or name change	68913	APPROVED
2021-05-24	WBD-Prdm14^{tm1(H2BVenus)Nips}	WI-Prdm14^{tm1(H2BVenus)Nips}	Symbol and/or name change	68913	APPROVED
2021-04-01	WI-Prdm14^{tm1(H2BVenus)Nips}	WI-Prdm14tm1(H2BVenus)Nips	Symbol and/or name change	68913	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: WI;WDB-Prdm14tm1(H2BVenus)Nips

Strain: WI;WDB-Prdm14^{tm1(H2BVenus)Nips}