Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: LE-Fmr1em4Mcwi

Symbol: LE-Fmr1em4Mcwi
Strain: LE-Fmr1em4
Substrain: Mcwi
RGD ID: 11553875
Citation ID: RRID:RGD_11553875
Ontology ID: RS:0004245
Alleles: Fmr1em4Mcwi
Also Known As: LE-Fmr1em4Mcwi; LE-Fmr1^[em4Mcwi]
Type: mutant
Available Source: Contact MCW rat distribution at
Origination: MCW Gene Editing Rat Resource Center
Description: CRISPR/Cas9 system was used to introduce a mutation in the Fmr1 gene of Crl:LE rat embryos. The resulting mutation is a 2-bp deletion in exon 8 of the Fmr1 gene.
Last Known Status: Cryopreserved Sperm (as of 2021-11-03)
Genotyping Protocol Download Genotyping Protocol
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X147,240,239 - 147,278,057RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0X154,703,634 - 154,703,635RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01150,408,220 - 150,445,658RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4X154,756,031 - 154,793,782RGD_MAPPER_PIPELINERGSC3.4



Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Fmr1em4Mcwi-var1 chrX 154703634 154703635 AG - deletion Rnor_6.0

Additional Information