Strain Report - Rat Genome Database

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Strain: F344.ZUC-(Leprfa),OLETF-(D14Rat23-D14Rat12)/Tj

Symbol: F344.ZUC-(Leprfa),OLETF-(D14Rat23-D14Rat12)/Tj
Strain: F344.ZUC-(Leprfa),OLETF-(D14Rat23-D14Rat12)
Substrain: Tj
RGD ID: 10755350
Citation ID: RRID:RGD_10755350
Ontology ID: RS:0004089
Previously known as: F344.ZUC-(Leprfa),OLETF-(D14Rat23-D14Rat12)/Tj; F.ZF-Lepr & Nidd2/of; f344-fa-nidd2
Type: congenic
Source: National BioResource Project for the Rat in Japan
Origin: The F344.ZUC,OLETF double congenic was produced by crossing F344.ZUC-Leprfa with F344.OLETF-( D14Rat23-D14Rat12) and then selecting Leprfa -Niddm20 (fa/fa-Nidd2/of) homozygotes
Last Known Status: Unknown
Research Usage Diabetes Obesity
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25116,294,409 - 116,477,904RGD_MAPPER_PIPELINEmRatBN7.2
mRatBN7.2141,217,606 - 39,153,750RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0142,227,825 - 61,783,215RGD_MAPPER_PIPELINERnor6.0
Rnor_6.05120,503,475 - 120,682,281RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0142,222,207 - 61,886,417RGD_MAPPER_PIPELINERnor5.0
Rnor_5.05124,380,327 - 124,556,585RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4141,764,386 - 41,707,592RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.45122,320,075 - 122,503,449RGD_MAPPER_PIPELINERGSC3.4





References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. New animal models reveal that coenzyme Q2 (Coq2) and placenta-specific 8 (Plac8) are candidate genes for the onset of type 2 diabetes associated with obesity in rats. Sasaki D, etal., Mamm Genome. 2015 Dec;26(11-12):619-29. doi: 10.1007/s00335-015-9597-4. Epub 2015 Aug 22.

Region

Position Markers

Flank 1 / 2 (D14Rat23)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2141,217,606 - 1,217,776 (+)MAPPER
Rnor_6.0142,227,825 - 2,227,992NCBI
Rnor_5.0142,222,207 - 2,222,374UniSTS
RGSC_v3.4141,764,386 - 1,764,554RGD
RGSC_v3.4141,764,387 - 1,764,554UniSTS
RGSC_v3.1141,764,386 - 1,764,554RGD
Celera141,256,962 - 1,257,129UniSTS
RH 2.0 Map140.0RGD
FHH x ACI Map141.33RGD

Flank 2 / 2 (D14Rat12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21439,153,581 - 39,153,750 (-)MAPPER
Rnor_6.01461,783,047 - 61,783,215NCBI
Rnor_5.01461,886,249 - 61,886,417UniSTS
RGSC_v3.41441,707,423 - 41,707,592RGD
RGSC_v3.41441,707,424 - 41,707,592UniSTS
RGSC_v3.11441,709,814 - 41,709,983RGD
Celera1438,346,383 - 38,346,551UniSTS
RH 2.0 Map14500.7RGD
SHRSP x BN Map1427.1799RGD

Flank 1 / 1 (Lepr)
Rat AssemblyChrPosition (strand)Source
mRatBN7.25116,294,409 - 116,477,904 (+)NCBI
mRatBN7.2 Ensembl5116,289,823 - 116,475,908 (+)Ensembl
UTH_Rnor_SHR_Utx5118,847,763 - 119,019,098 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.05120,573,106 - 120,744,441 (+)NCBI
UTH_Rnor_WKY_Bbb_1.05120,624,429 - 120,795,760 (+)NCBI
Rnor_6.05120,503,475 - 120,682,281 (+)NCBI
Rnor_6.0 Ensembl5120,564,645 - 120,682,221 (+)Ensembl
Rnor_5.05124,380,327 - 124,525,200 (+)NCBI
Rnor_5.05124,555,678 - 124,556,585 (+)NCBI
RGSC_v3.45122,320,075 - 122,503,449NCBI
Celera5114,817,255 - 114,982,861 (+)NCBI
RH 3.4 Map5 RGD
Cytogenetic Map5q33NCBI

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-09-06 F344.ZUC-(Leprfa),OLETF-(D14Rat23-D14Rat12)/Tj    F344.ZUC-(Leprfa),OLETF-(D14Rat23-D14Rat12)/Tj    Name updated 68913 APPROVED
2016-09-06 F344.ZUC-(Leprfa),OLETF-(D14Rat23-D14Rat12)/Tj    F344.ZUC-(Leprfa),OLETF-(D14Rat23-D14Rat12)/Tj    Name updated 68913 APPROVED