Strain Report - Rat Genome Database

Name: FHH.FHH.3 BN -( D3Hmgc24-3q )( 3p-D3Rat98 )/Mcwi
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Strain Registration

General

Strain: FHH.FHH.3^BN-(D3Hmgc24-3q)(3p-D3Rat98)/Mcwi

Symbol:

FHH.FHH.3^BN-(D3Hmgc24-3q)(3p-D3Rat98)/Mcwi

Strain:

FHH.FHH.3^BN-(D3Hmgc24-3q)(3p-D3Rat98)

Substrain:

Mcwi

RGD ID:

10395253

Citation ID:

RRID:RGD_10395253

Ontology ID:

RS:0004035

Previously known as:

FHH.FHH.3BN-(D3Hmgc24-3q)(3p-D3Rat98)/Mcwi

Type:

congenic

Source:

Medical College of Wisconsin, Milwaukee, Wisconsin

Origin:

(FHH X FHH-3^BN/Mcwi) F₂ males were backcrossed with FHH-3^BN/Mcwi females to produce offsprings, these were intercrossed to generate this congenic line

Last Known Status:

Unknown

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	33,703,347 - 33,703,538	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	3	33,477,354 - 33,477,544	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	3	38,636,977 - 38,637,167	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	3	30,253,942 - 30,254,280	RGD_MAPPER_PIPELINE	RGSC3.4

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Data registered by Dr. Howard Jacob's group	Personal communication between Dr. Howard Jacob's group and the RGD curators.
2.	RGD Strain RSO annotation pipeline	RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D3Hmgc24)

No map positions available.

Flank 2 / 2 (D3Rat98)

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	33,703,347 - 33,703,538 (+)	MAPPER
Rnor_6.0	3	33,477,354 - 33,477,544	NCBI
Rnor_5.0	3	38,636,977 - 38,637,167	UniSTS
RGSC_v3.4	3	30,253,942 - 30,254,280	RGD
RGSC_v3.4	3	30,253,945 - 30,254,135	UniSTS
RGSC_v3.1	3	30,150,317 - 30,150,507	RGD
Celera	3	31,894,389 - 31,894,579	UniSTS
RH 3.4 Map	3	398.9	RGD
RH 3.4 Map	3	398.9	UniSTS
SHRSP x BN Map	3	15.1498	UniSTS
SHRSP x BN Map	3	15.1498	RGD
FHH x ACI Map	3	23.97	RGD
Cytogenetic Map	3	q12	UniSTS

Additional Information

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: FHH.FHH.3BN-(D3Hmgc24-3q)(3p-D3Rat98)/Mcwi

Strain: FHH.FHH.3^BN-(D3Hmgc24-3q)(3p-D3Rat98)/Mcwi