Strain Report - Rat Genome Database

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Strain: SS.BN-(D13Rat124-D13Hmgc3694)/Mcwi

Symbol: SS.BN-(D13Rat124-D13Hmgc3694)/Mcwi
Strain: SS.BN-(D13Rat124-D13Hmgc3694)
Substrain: Mcwi
RGD ID: 10054473
RRID: RGD_10054473
Ontology ID: RS:0004019
Also known as: SS.BN-(D13Rat124-D13Hmgc3694)/Mcwi; SSBN13-ka
Type: congenic
Source: Medical College of Wisconsin, Milwaukee, Wisconsin
Origin: SS/JrHsdMcwi were crossed with SS-13BN/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21345,228,358 - 45,228,590RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01350,609,228 - 50,609,459RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01355,662,705 - 55,662,936RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4130 - 46,721,269RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
1. Personal communication between Dr. Melinda Dwinell’s group and the RGD curators
2. RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D13Rat124)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21345,228,358 - 45,228,590 (+)MAPPER
Rnor_6.01350,609,228 - 50,609,459NCBI
Rnor_5.01355,662,705 - 55,662,936UniSTS
RGSC_v3.41346,721,038 - 46,721,269UniSTS
RGSC_v3.41346,721,037 - 46,721,269RGD
RGSC_v3.11346,735,081 - 46,735,312RGD
Celera1345,558,778 - 45,559,009UniSTS
RH 3.4 Map13174.1RGD
RH 3.4 Map13174.1UniSTS
RH 2.0 Map13377.4RGD
SHRSP x BN Map1314.7498RGD

Flank 2 / 1 (D13Hmgc3694)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.4130 - 0RGD

Additional Information