Strain Report - Rat Genome Database

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Strain: BBDP.ACI-(D2Rat50-D2Rat63)/Sunn

Symbol: BBDP.ACI-(D2Rat50-D2Rat63)/Sunn
Strain: BBDP.ACI-(D2Rat50-D2Rat63)
Substrain: Sunn
RGD ID: 10043132
Citation ID: RRID:RGD_10043132
Ontology ID: RS:0003903
Previously known as: BBDP.ACI-(D2Rat50-D2Rat63)/Sunn; 2BAe
Type: congenic
Source: Sunnybrook Research Institute, Toronto, Ontario, Canada
Origin: 104 Mb region from ACI.BBDP-(RT1u),(Gimap5)/Sunn is introgressed into the BBDP/WorSunn background which carries the centromeric region of Iddm33 and telomeric region of Iddm26
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22192,625,307 - 222,436,696RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02207,612,323 - 239,166,203RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02227,035,223 - 257,699,856RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42200,390,326 - 231,465,091RGD_MAPPER_PIPELINERGSC3.4

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype


References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Genetic dissection of Iddm26 in the spontaneously diabetic BBDP rat. Sarmiento J, etal., Genes Immun. 2014 Sep;15(6):378-91. doi: 10.1038/gene.2014.29. Epub 2014 Jun 12.


Position Markers

Flank 1 / 1 (D2Rat50)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22192,625,307 - 192,625,452 (+)MAPPER
Rnor_6.02207,612,323 - 207,612,467NCBI
Rnor_5.02227,035,223 - 227,035,367UniSTS
RGSC_v3.42200,390,326 - 200,390,471RGD
RGSC_v3.42200,390,327 - 200,390,471UniSTS
RGSC_v3.12200,352,887 - 200,353,226RGD
Celera2185,090,977 - 185,091,121UniSTS
SHRSP x BN Map274.0098UniSTS
SHRSP x BN Map274.0098RGD

Flank 2 / 1 (D2Rat63)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22222,436,573 - 222,436,696 (+)MAPPER
Rnor_6.02239,166,081 - 239,166,203NCBI
Rnor_5.02257,699,734 - 257,699,856UniSTS
RGSC_v3.42231,464,968 - 231,465,091RGD
RGSC_v3.42231,464,969 - 231,465,091UniSTS
RGSC_v3.12231,451,708 - 231,451,831RGD
Celera2214,666,794 - 214,666,916UniSTS
RH 2.0 Map21115.0RGD
SHRSP x BN Map294.3198RGD
FHH x ACI Map2106.9199RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics mean age of onset is 85.1 days as compared to BBDP is 80.8 days 10043114