Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: BBDP.ACI-(D2Arb16-D2Rat63)/Sunn

Symbol: BBDP.ACI-(D2Arb16-D2Rat63)/Sunn
Strain: BBDP.ACI-(D2Arb16-D2Rat63)
Substrain: Sunn
RGD ID: 10043129
Citation ID: RRID:RGD_10043129
Ontology ID: RS:0003902
Previously known as: BBDP.ACI-(D2Arb16-D2Rat63)/Sunn; 2BAa
Type: congenic
Source: Sunnybrook Research Institute, Toronto, Ontario, Canada
Origin: 104 Mb region from ACI.BBDP-(RT1u),(Gimap5)/Sunn is introgressed into the BBDP/WorSunn background which carries the centromeric region of Iddm33 and telomeric region of Iddm26
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22190,602,746 - 222,436,696RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02205,572,952 - 239,166,203RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02225,003,539 - 257,699,856RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42198,312,439 - 231,465,091RGD_MAPPER_PIPELINERGSC3.4


References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Genetic dissection of Iddm26 in the spontaneously diabetic BBDP rat. Sarmiento J, etal., Genes Immun. 2014 Sep;15(6):378-91. doi: 10.1038/gene.2014.29. Epub 2014 Jun 12.


Position Markers

Flank 1 / 1 (D2Arb16)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22190,602,746 - 190,602,963 (+)MAPPER
Rnor_6.02205,572,952 - 205,573,168NCBI
Rnor_5.02225,003,539 - 225,003,755UniSTS
RGSC_v3.42198,312,439 - 198,312,656RGD
RGSC_v3.42198,312,440 - 198,312,656UniSTS
RGSC_v3.12198,275,193 - 198,275,410RGD
Celera2183,076,093 - 183,076,309UniSTS
SHRSP x BN Map272.7698UniSTS
SHRSP x BN Map272.7698RGD
Cytogenetic Map2q34UniSTS

Flank 2 / 1 (D2Rat63)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22222,436,573 - 222,436,696 (+)MAPPER
Rnor_6.02239,166,081 - 239,166,203NCBI
Rnor_5.02257,699,734 - 257,699,856UniSTS
RGSC_v3.42231,464,968 - 231,465,091RGD
RGSC_v3.42231,464,969 - 231,465,091UniSTS
RGSC_v3.12231,451,708 - 231,451,831RGD
Celera2214,666,794 - 214,666,916UniSTS
RH 2.0 Map21115.0RGD
SHRSP x BN Map294.3198RGD
FHH x ACI Map2106.9199RGD
Strain QTL Data
Symbol Name Trait
Iddm55 Insulin dependent diabetes mellitus QTL 55 blood glucose amount   (VT:0000188)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics mean age of onset is 84.2 days as compared to BBDP is 80.8 days 10043114