rs7806224 Rat Genome Database

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Variant: rs7806224 -  Homo sapiens

RGD ID: 151330213
RS ID: rs7806224
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: PDE1C  
Reference Nucleotide: T
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh38 7 32,233,495
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs7806224Humancigarettes per day measurement  IAGP 405850206 GWAS_CATALOGPMID:30679032
rs7806224Humantobacco smoke exposure measurement  IAGP 405850206 GWAS_CATALOGPMID:30679032
GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1126801_H GCST008803 Smoking behaviour (cigarette pack-years) up to 150,993 European ancestry individuals C 0.375 3E-16 15.523 rs7806224 0.0287 tobacco smoke exposure measurement (EFO:0009115)
 PMID:30679032
GWAS1127511_H GCST008809 Smoking behaviour (cigarettes smoked per day) up to 153,918 European ancestry individuals C 0.371 1E-10 10 rs7806224 0.0244 cigarettes per day measurement (EFO:0006525)
 PMID:30679032

Variant Details
Variant Transcripts
Gene Symbol:PDE1C
Accession:NM_001322055
Location:INTRON

Gene Symbol:PDE1C
Accession:NM_001322057
Location:INTRON

Gene Symbol:PDE1C
Accession:NM_001191058
Location:INTRON

Gene Symbol:PDE1C
Accession:NM_001322056
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_047420440
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_047420444
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_047420446
Location:INTRON

Gene Symbol:PDE1C
Accession:NM_005020
Location:INTRON

Gene Symbol:PDE1C
Accession:NM_001322059
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_047420445
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_017012266
Location:INTRON

Gene Symbol:PDE1C
Accession:NM_001191057
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_017012264
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_017012265
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_047420443
Location:INTRON

Gene Symbol:PDE1C
Accession:NM_001191059
Location:INTRON

Gene Symbol:PDE1C
Accession:NM_001322058
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_017012267
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_047420442
Location:INTRON

Gene Symbol:PDE1C
Accession:XM_047420441
Location:INTRON

Gene Symbol:PDE1C
Accession:NM_001191056
Location:INTRON

Gene Symbol:PDE1C
Accession:XR_007060044
Location:INTRON;NON-CODING

Gene Symbol:PDE1C
Accession:XR_007060043
Location:INTRON;NON-CODING

Gene Symbol:PDE1C
Accession:XR_001744803
Location:INTRON;NON-CODING

Gene Symbol:PDE1C
Accession:XR_007060041
Location:INTRON;NON-CODING

Gene Symbol:PDE1C
Accession:XR_001744802
Location:INTRON;NON-CODING

Gene Symbol:PDE1C
Accession:XR_007060042
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST008803 GWAS Catalog
  GCST008809 GWAS Catalog