rs7290315 Rat Genome Database

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Variant: rs7290315 -  Homo sapiens

RGD ID: 406254228
RS ID: rs7290315
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: LARGE1  
Reference Nucleotide: G
Variant Nucleotide: ?
Position
Assembly Chr Position
GRCh38 22 33,178,381
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs7290315Humanquinolinic acid measurement  IAGP 405850206 GWAS_CATALOGPMID:23823483
GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS697180_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000008 5.097 rs7290315 0.22900543 quinolinic acid measurement (EFO:0010528)
 PMID:23823483

Variant Details
Variant Transcripts
Gene Symbol:LARGE1
Accession:NM_004737
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_047441605
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_133642
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001362951
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001378628
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001378630
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_047441606
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001378631
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_047441599
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_024452302
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_024452303
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001362953
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_047441601
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_047441603
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_047441600
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_047441604
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001378627
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001378626
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001378625
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_047441602
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001362949
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001378624
Location:INTRON

Gene Symbol:LARGE1
Accession:NM_001378629
Location:INTRON

Gene Symbol:LARGE1
Accession:XM_011530513
Location:INTRON

Gene Symbol:LARGE1
Accession:XR_007067993
Location:INTRON;NON-CODING

Gene Symbol:LARGE1
Accession:XR_002958722
Location:INTRON;NON-CODING

Gene Symbol:LARGE1
Accession:XR_007067994
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog