rs11676084 Rat Genome Database

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Variant: rs11676084 -  Homo sapiens

RGD ID: 406246082
RS ID: rs11676084
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: NOSTRIN  
Reference Nucleotide: G
Variant Nucleotide: ?
Position
Assembly Chr Position
GRCh38 2 168,847,464
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs11676084Humanblood 3-hydroxybutyrate amount  IAGP 405850206Based on the EFO term IDGWAS_CATALOGPMID:23823483

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
rs11676084Humanalpha-hydroxybutyric acid measurement  IAGP 405850206 GWAS_CATALOGPMID:23823483
rs11676084Humanbeta-hydroxybutyric acid measurement  IAGP 405850206 GWAS_CATALOGPMID:23823483
rs11676084Humansexual dimorphism measurement  IAGP 405850206 GWAS_CATALOGPMID:37277458
Experimental Data Annotations     Click to see Annotation Detail View

Vertebrate Trait

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS747291_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 3E-7 6.523 rs11676084 0.23657537 alpha-hydroxybutyric acid measurement (EFO:0010458)
 PMID:23823483
GWAS811111_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000007 5.155 rs11676084 0.21127582 beta-hydroxybutyric acid measurement (EFO:0010465)
 PMID:23823483
GWAS1434703_H GCST90270116 Multi-trait sex score 161,906 European ancestry females ? NR 1E-11 11 rs11676084 N/A sexual dimorphism measurement (EFO:0021796)
 PMID:37277458

Variant Details
Variant Transcripts
Gene Symbol:NOSTRIN
Accession:XM_006712233
Location:INTRON

Gene Symbol:NOSTRIN
Accession:XM_017003279
Location:INTRON

Gene Symbol:NOSTRIN
Accession:XM_024452662
Location:INTRON

Gene Symbol:NOSTRIN
Accession:XM_047443189
Location:INTRON

Gene Symbol:NOSTRIN
Accession:XM_005246270
Location:INTRON

Gene Symbol:NOSTRIN
Accession:NM_052946
Location:INTRON

Gene Symbol:NOSTRIN
Accession:NM_001171632
Location:INTRON

Gene Symbol:NOSTRIN
Accession:XM_011510543
Location:INTRON

Gene Symbol:NOSTRIN
Accession:NM_001039724
Location:INTRON

Gene Symbol:NOSTRIN
Accession:XM_011510540
Location:INTRON

Gene Symbol:NOSTRIN
Accession:NM_001171631
Location:INTRON

Gene Symbol:NOSTRIN
Accession:XM_017003278
Location:INTRON

Gene Symbol:NOSTRIN
Accession:XR_007069110
Location:INTRON;NON-CODING

Gene Symbol:NOSTRIN
Accession:XR_922836
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog
  GCST90270116 GWAS Catalog