rs10097386 Rat Genome Database

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Variant: rs10097386 -  Homo sapiens

RGD ID: 406276948
RS ID: rs10097386
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: AC091096.1  
Reference Nucleotide: C
Variant Nucleotide: ?
Position
Assembly Chr Position
GRCh38 8 92,633,008
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
cleft lip  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Cleft lip  (IAGP)
Cleft palate  (IAGP)
GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1114612_H GCST009544 Cleft lip with or without cleft palate x maternal periconceptional smoking interaction (parent of origin effect) 825 European ancestry case-parent duos or trios, 1,024 Asian ancestry case-parent duos or trios, 59 case-parent duos or trios ? NR 0.000003 5.523 rs10097386 2.86 Cleft palate (HP:0000175)
tobacco smoke exposure measurement (EFO:0009115)
cleft lip (EFO:0003959)
parental genotype effect measurement (EFO:0005939)
 PMID:31372216

Variant Details
Variant Transcripts
Gene Symbol:AC091096.1
Accession:NR_125827
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
GWAS Catalog GCST009544 GWAS Catalog