RGD Reference Report - KEGG Annotation Import Pipeline - Rat Genome Database

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KEGG Annotation Import Pipeline

Authors: RGD data, PIPELINE 
Citation: Pipeline to import KEGG annotations from KEGG into RGD
RGD ID: 6907045

The Kyoto Encyclopedia of Genes and Genomes (KEGG) Annotation Pipeline Data were imported from the downloaded KEGG data before the site changed its licenses (KEGG - http://www.genome.jp/kegg/). Data were extracted from the species files for rat, mouse and human. The map IDs in the file were searched for mapping to pathway term IDs in the Pathway Ontology (PW) via related_synonym. Genes were then matched to RGD rat, mouse and human genes using the Entrez gene ID and the gene symbol. Genes for the three species were assigned to PW terms with evidence code IEA or 'Inferred from Electronic Annotation'.