Bp366 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp366 (Blood pressure QTL 366) Rattus norvegicus

Symbol: Bp366
Name: Blood pressure QTL 366
RGD ID: 7488929
Previously known as: C2QTL6
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: mean arterial blood pressure   (CMO:0000009)    
LOD Score: Not Available
P Value: 0.001
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22184,974,550 - 193,094,998RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02199,954,569 - 208,081,195RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02219,408,246 - 227,502,148RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42192,478,177 - 200,866,813RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: SS.MNS-(D2Chm366-D2Rat52)/Ayd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Atp1a1 is a candidate Gene for Bp366

Disease Annotations     Click to see Annotation Detail View
Hypotension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Modularization and epistatic hierarchy determine homeostatic actions of multiple blood pressure quantitative trait loci. Chauvet C, etal., Hum Mol Genet. 2013 Nov 15;22(22):4451-9. doi: 10.1093/hmg/ddt294. Epub 2013 Jun 28.
2. Cardiac pathways distinguish two epistatic modules enacting BP quantitative trait loci and candidate gene analysis. Chauvet C, etal., Hypertens Res. 2009 Jul;32(7):631-7. doi: 10.1038/hr.2009.70. Epub 2009 May 22.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1333002Olr391-psolfactory receptor pseudogene 3912184986831184987757Rat
1311935Chd1lchromodomain helicase DNA binding protein 1-like2185138526185217498Rat
628602Fmo5flavin containing dimethylaniline monoxygenase 52185197184185249699Rat
620905Prkab2protein kinase AMP-activated non-catalytic subunit beta 22185257218185272846Rat
11504996Trnaq-cug4transfer RNA glutamine (anticodon CUG) 42185282571185282642Rat
7722057LOC102550575uncharacterized LOC1025505752185284310185296157Rat
708410Pde4dipphosphodiesterase 4D interacting protein2185293236185490100Rat
1309988Sec22bSEC22 homolog B, vesicle trafficking protein2185500029185520811Rat
7710894Smim15-ps1small integral membrane protein 15, pseudogene2185543452185547497Rat
41256124LOC120100890uncharacterized LOC1201008902185576866185610510Rat
3188Notch2notch receptor 22185610594185744088Rat
1594713Adam30ADAM metallopeptidase domain 302185752183185755623Rat
2319742Rpl37a-ps4ribosomal protein L37A, pseudogene 42185757076185765739Rat
1303341Reg4regenerating family member 42185821210185832771Rat
2804Hmgcs23-hydroxy-3-methylglutaryl-CoA synthase 22185875609185903505Rat
61987Phgdhphosphoglycerate dehydrogenase2185906964185936160Rat
41032544LOC120100891histone H3.32185948904185950416Rat
41023904LOC120100892uncharacterized LOC1201008922185961410185970497Rat
1308711Zfp697zinc finger protein 6972185970438186003884Rat
2838Hsd3b5hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 52186008944186028417Rat
1589580Hsd3b5-ps1hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5, pseudogene 12186063213186075208Rat
67377Hsd3b2hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 22186095897186105354Rat
1592771Hsd3b3hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 32186138044186144024Rat
1308676Hsd3b1hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 12186169864186175984Rat
41314480LOC120100893uncharacterized LOC1201008932186188624186203407Rat
70972Hao2hydroxyacid oxidase 22186200137186232997Rat
41391583LOC120100894uncharacterized LOC1201008942186213280186267295Rat
41163591LOC120100604small nuclear ribonucleoprotein G-like2186400521186402953Rat
41070728LOC120101247small nucleolar RNA SNORA442186431517186431646Rat
41075962LOC120101313small nucleolar RNA SNORA172186442544186442670Rat
1593421Rpl8-ps2ribosomal protein L8, pseudogene 22186445751186446506Rat
1593417Wars2tryptophanyl tRNA synthetase 2 (mitochondrial)2186459744186543581Rat
1308094Tbx15T-box transcription factor 152186576347186687748Rat
7574575LOC102553016uncharacterized LOC1025530162186684617186685519Rat
1561508Rps10-ps12ribosomal protein S10, pseudogene 122186699963186707194Rat
41245994Ndufa7-ps2NADH:ubiquinone oxidoreductase subunit A7, pseudogene 22186951260186951576Rat
1587997Rpl21-ps19ribosomal protein L21, pseudogene 192187242949187244055Rat
1592218Spag17sperm associated antigen 172187264004187511061Rat
40984078Set-ps9Set nuclear proto-oncogene, pseudogene 92187446094187448025Rat
1307480Wdr3WD repeat domain 32187505816187528432Rat
1306050Gdap2ganglioside-induced differentiation-associated-protein 22187528514187585270Rat
1359446Tent5cterminal nucleotidyltransferase 5C2187853026187875260Rat
7593080LOC102554693uncharacterized LOC1025546932187874485187903257Rat
41150836LOC120100896uncharacterized LOC1201008962187915224187968127Rat
1309767Man1a2mannosidase, alpha, class 1A, member 22187947484188096332Rat
40990801LOC120101319small nucleolar RNA SNORA172187954263187954389Rat
1590374Zdhhc3-ps1zinc finger DHHC-type palmitoyltransferase 3, pseudogene 12188086258188095203Rat
41091310LOC120100606uncharacterized LOC1201006062188110489188120804Rat
9287828LOC103691647uncharacterized LOC1036916472188142509188174361Rat
1589579Cfl1-ps9cofilin 1, pseudogene 92188213237188214212Rat
1311204Vtcn1V-set domain containing T cell activation inhibitor 12188253594188321658Rat
41091713LOC120100897uncharacterized LOC1201008972188301863188337024Rat
1309168Trim45tripartite motif-containing 452188349979188359205Rat
1309145Ttf2transcription termination factor 22188366321188397750Rat
41168535Rpl18a-ps3ribosomal protein L18A, pseudogene 32188383433188383934Rat
1311453Cd101CD101 molecule2188422989188459536Rat
3437Ptgfrnprostaglandin F2 receptor inhibitor2188469521188544795Rat
2297Cd2Cd2 molecule2188710895188724044Rat
11427065Ppia-ps5peptidylprolyl isomerase A, pseudogene 52188745964188746856Rat
1307796Igsf3immunoglobulin superfamily, member 32188811394188899645Rat
2167Atp1a1ATPase Na+/K+ transporting subunit alpha 12189020722189048826Rat
9242885LOC103691652uncharacterized LOC1036916522189049024189065436Rat
1308694Mab21l3mab-21 like 32189248895189271652Rat
1311184Slc22a15solute carrier family 22, member 152189298832189359902Rat
41028131LOC120100898uncharacterized LOC1201008982189324221189329203Rat
1308294Nhlh2nescient helix loop helix 22189444287189449625Rat
2318707Dnajb6-ps1DnaJ heat shock protein family (Hsp40) member B6, pseudogene 12189480416189508700Rat
2276Casq2calsequestrin 22189526003189582276Rat
1597324Vangl1VANGL planar cell polarity protein 12189586681189637609Rat
7619002LOC102549693uncharacterized LOC1025496932189861972189894841Rat
1598328Ngfnerve growth factor2189901058189954452Rat
7621937LOC102549793uncharacterized LOC1025497932189990719189997200Rat
620982Tspan2tetraspanin 22190177717190234994Rat
3910Tshbthyroid stimulating hormone subunit beta2190224676190229559Rat
3794Sycp1synaptonemal complex protein 12190296688190456687Rat
1596077Nr1h5nuclear receptor subfamily 1, group H, member 52190461036190481420Rat
11512390LOC108350203glyceraldehyde-3-phosphate dehydrogenase pseudogene2190501150190503229Rat
1311316Sike1suppressor of IKBKE 12190518002190525833Rat
41016981Rpl15-ps13ribosomal protein L15, pseudogene 132190528893190530282Rat
41295228Lyrm7-ps1LYR motif containing 7, pseudogene 12190534205190540332Rat
619726Csde1cold shock domain containing E12190546015190582790Rat
3205NrasNRAS proto-oncogene, GTPase2190582885190593509Rat
2109Ampd1adenosine monophosphate deaminase 12190598707190619938Rat
1308197Dennd2cDENN domain containing 2C2190622357190690489Rat
1306485Bcas2BCAS2, pre-mRNA processing factor2190692503190700386Rat
1588671LOC691020similar to Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (Nuclear LIM interactor-interacting factor 3) (NLI-interacting factor 3) (Golli-interacting protein) (GIP)2190711966190719433Rat
9254022LOC103690210carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 pseudogene2190727117190729545Rat
41175319LOC120100607glutamic acid-rich protein-like2190744085190744945Rat
1307339Trim33tripartite motif-containing 332190812329190892663Rat
41199385LOC120101328small nucleolar RNA SNORA172190921004190921108Rat
2324347LOC100362611Uncharacterized protein C8orf59 homolog2190988658190988944Rat
62012Syt6synaptotagmin 62191093009191152283Rat
41273284LOC120100901uncharacterized LOC1201009012191121282191145830Rat
7606083LOC102546891uncharacterized LOC1025468912191168486191178791Rat
40967472LOC120101371small nucleolar RNA U132191176448191176545Rat
7497089LOC102547265uncharacterized LOC1025472652191241201191248106Rat
1311106Olfml3olfactomedin-like 32191244221191247050Rat
1304941Hipk1homeodomain interacting protein kinase 12191248817191299787Rat
11417770LOC108350077uncharacterized LOC1083500772191280702191294884Rat
40927573LOC120100902uncharacterized LOC1201009022191307229191309662Rat
1310343Dclre1bDNA cross-link repair 1B2191309909191318399Rat
1310529Ap4b1adaptor related protein complex 4 subunit beta 12191318485191330531Rat
1562344Bcl2l15Bcl2-like 152191338959191344078Rat
1307992Ptpn22protein tyrosine phosphatase, non-receptor type 222191366761191414782Rat
9343708Rpl36a-ps15ribosomal protein L36A, pseudogene 152191373394191373907Rat
1307231Rsbn1round spermatid basic protein 12191416631191470711Rat
620426Phtf1putative homeodomain transcription factor 12191470849191537399Rat
621362Magi3membrane associated guanylate kinase, WW and PDZ domain containing 32191514726191717048Rat
41051527LOC120100903uncharacterized LOC1201009032191537601191555585Rat
40938652LOC120101331small nucleolar RNA SNORA172191704272191704412Rat
11466902LOC108350079uncharacterized LOC1083500792191769033191780344Rat
7738059Rpl17-ps14ribosomal protein L17, pseudogene 142191880794191882997Rat
9075725LOC103691658uncharacterized LOC1036916582191890350191916437Rat
1564469Rplp0l1ribosomal protein lateral stalk subunit P0 like 12191921503191922661Rat
1309554Lrig2leucine-rich repeats and immunoglobulin-like domains 22191947322192012996Rat
41153941LOC120101182U6 spliceosomal RNA2192089415192089519Rat
41014042Trnal-aag9transfer RNA leucine (anticodon AAG) 92192111460192111540Rat
3690Slc16a1solute carrier family 16 member 12192123755192144617Rat
7587027LOC102547750uncharacterized LOC1025477502192156539192163141Rat
41223454Rnu6-406RNA, U6 small nuclear 4062192187388192187488Rat
9142237LOC103691660uncharacterized LOC1036916602192190947192208024Rat
11408202LOC108350080uncharacterized LOC1083500802192216401192226586Rat
1587462Tafa3TAFA chemokine like family member 32192264153192280356Rat
1359104Ppm1jprotein phosphatase, Mg2+/Mn2+ dependent, 1J2192278597192283883Rat
41074779LOC120101048translation initiation factor IF-2-like2192286701192290095Rat
1304965Rhocras homolog family member C2192287065192293292Rat
1598327Mov10Mov10 RISC complex RNA helicase2192292041192315142Rat
1587438Capza1capping actin protein of muscle Z-line subunit alpha 12192319696192364755Rat
1359336St7lsuppression of tumorigenicity 7-like2192364594192434414Rat
69346Wnt2bWnt family member 2B2192454226192468599Rat
1592010Rps6-ps6ribosomal protein S6, pseudogene 62192486313192487020Rat
1310822Cttnbp2nlCTTNBP2 N-terminal like2192507963192554548Rat
41372517LOC120100905uncharacterized LOC1201009052192577785192578931Rat
41325535Rps23-ps7ribosomal protein S23, pseudogene 72192589133192590428Rat
7728955LOC102548357uncharacterized LOC1025483572192590940192616687Rat
7574026LOC102548297uncharacterized LOC1025482972192594348192608842Rat
7553439LOC102548417uncharacterized LOC1025484172192784135192790343Rat
41255498LOC120100906uncharacterized LOC1201009062192862767192868972Rat
9168487LOC103691662uncharacterized LOC1036916622192884560192890417Rat
41163144LOC120100907translation initiation factor IF-2-like2192927607192938521Rat
68394Kcnd3potassium voltage-gated channel subfamily D member 32192937950193155345Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10153D2Wox371512190613715190613866Ratregion
10200D2Mgh112222189039155189039377Ratregion
10202D2Arb182422189039155189039429Ratregion
10712D2Mgh101472185876309185876470Ratregion
10737D2Wox251262186009113186009259Ratregion
10738D2Arb202182186009118186009356Ratregion
34759D2Rat521662193094852193094998Ratregion
11298D2Wox362182192143218192143436Ratregion
33727D2Mit141002189599258189599348Ratregion
36323D2Rat491312190053509190053640Ratregion
37260D2Rat892202188925013188925231Ratregion
37316D13Rat531862185302209185302393Ratregion
36801D2Rat471652186283938186284099Ratregion
37700D2Rat1322082188657176188657378Ratregion
37928D2Rat992052189367732189367927Ratregion
36773D2Rat501472192625307192625452Ratregion
40418D2Rat2881602188328027188328181Ratregion
38668D2Rat1862022191762155191762347Ratregion
40290D2Rat2331432190313133190313268Ratregion
40346D2Rat2351712189529583189529737Ratregion
42110D2Arb162102190602746190602963Ratregion
42612D2Rat3532182185188754185188985Ratregion
42616D2Rat3542392191987426191987650Ratregion
41852D2Rat2872052192147642192147855Ratregion
43560D2Got124832187202328187202411Ratregion
43562D2Got1211822186483461186483643Ratregion
43563D2Got1231812187941740187941920Ratregion
43564D2Got1252862187725523187725809Ratregion
43565D2Got1222822187332447187332726Ratregion
43568D2Got1271442189544741189544885Ratregion
43569D2Got1281282189367628189367815Ratregion
43569D2Got1281282189367687189367815Ratregion
43570D2Got1902772189534808189535085Ratregion
43571D2Got1292662190457112190457378Ratregion
43572D2Got1302372191224884191225124Ratregion
43573D2Got1311662190677232190677398Ratregion
43574D2Got1321532190680851190681004Ratregion
43575D2Wox341052191624814191624907Ratregion
60658D9Got192472192261793192263017Ratregion
60797D2Wox71002192245536192245657Ratregion
625766D2Got1361962193054714193054910Ratregion
67805D2Uwm221582188745811188745955Ratregion
67807D2Uwm233822187332360187332740Ratregion
67809D2Uwm241392190460423190460562Ratregion
1358039D2Chm572252185122147185122374Ratregion
1630210D2Got1202202188443262188443482Ratregion
1627323Tshb2622190227786190228048Ratregion
1638985D2Got4262192186583431186583652Ratregion
1636657D2Cebr12193071067193071289Ratregion
7205926PMC28413P11152190583526190583641Ratregion
7193109NGFB1042189953678189953782Ratregion
7193092AI0082621392192144759192144898Ratregion
5038860RH1273741942190525469190525663Ratregion
5039162RH1275471892185201535185201724Ratregion
5039076RH1274981932185142011185142204Ratregion
5039148RH1275401932185293277185293470Ratregion
5036613AU0485981252187937328187937457Ratregion
5031414AU0484001522192763199192763351Ratregion
5031420AU0483821052185237711185237816Ratregion
5031420AU0483821052185237711185237868Ratregion
5034033RH1411022032192292458192292661Ratregion
5026466RH1323182182192143478192143696Ratregion
5032121RH944531952190599884190600079Ratregion
5026844RH1337471502191309976191310126Ratregion
5035108SHGC-167381472191248825191248972Ratregion
5029641BE1018921882190571547190571735Ratregion
5035416BM3868311882188318063188318251Ratregion
5035426AI0077401982192426636192426834Ratregion
5027253AI8537031152185743489185743604Ratregion
5027255AW049785892191503972191504061Ratregion
5029897BF3941341942191949880191950074Ratregion
5035174AI5479731842187856817187857001Ratregion
5027719A001Z441852189020722189020907Ratregion
5030375BE1121811722185332836185333008Ratregion
5033045RH1373872012185743584185743785Ratregion
5025254RH1276091872185520490185520677Ratregion
5033295RH1383061442188078539188078683Ratregion
5030555BI2951112042191923661191923865Ratregion
5033379RH1386211542185343133185343287Ratregion
5033419RH1387652272189589397189589626Ratregion
5033651RH1396042092191249331191249540Ratregion
5025836RH1298761992187505975187506174Ratregion
5028424RH1182651452191247527191247672Ratregion
5031167BE1167631502185743488185743638Ratregion
5051156RH1344722142191330180191330393Ratregion
5055993RH1441211152185282801185282916Ratregion
5056207RH1442451632191344112191344275Ratregion
5056351RH1443281522189638944189639096Ratregion
5054071RH1430141472189249500189249647Ratregion
5057378AA8513862312190699228190700103Ratregion
5054815RH1434412462191249105191249355Ratregion
5058632BE1022141802185522613185522793Ratregion
5059638AI556616912188321347188321438Ratregion
5056721RH1445411782191299282191299460Ratregion
5052317U167402322192319951192320181Ratregion
5052430AA9603922892190582442190582731Ratregion
5052685RH1422061932189954674189954867Ratregion
5050286RH1339682192187853172187853391Ratregion
5050286RH1339682192187853172187853447Ratregion
5053307RH1425731772191807661191807838Ratregion
5053527RH1427001722191119471191119643Ratregion
5059320BG3773181522192295015192295167Ratregion
5057724BF3860951592190596689190596848Ratregion
5049984RH1337951802189065233189065413Ratregion
5052432AU0186242892192508119192508408Ratregion
5052613Slc16a16922192139990192140682Ratregion
5053951RH1429441262192509954192510080Ratregion
5054023RH1429861182185501419185501537Ratregion
5054469RH1432421422189360800189360942Ratregion
5053365RH1426062042186492919186493123Ratregion
5041772RH1290502022192120094192120296Ratregion
5044086RH1304022162186200443186200659Ratregion
5044234RH1304861892190892224190892413Ratregion
5041448RH1288621882185903279185903467Ratregion
5041778RH1290531862185521828185522014Ratregion
5041870RH12910602192144398192144579Ratregion
5048750RH1330832002188221384188221584Ratregion
5046590RH1318412032190518454190519956Ratregion
5045066RH1309632002186200637186200837Ratregion
5045714RH1313371572186095922186096079Ratregion
5046616RH1318561892192143959192144148Ratregion
5048042RH1326751812185819603185819784Ratregion
5048336RH1328441982186003657186003855Ratregion
5047182RH1321801802186459945186460125Ratregion
5042092RH1292341952190525510190525705Ratregion
5039656RH1278312112191947495191947706Ratregion
5042364RH1293921502186548387186548537Ratregion
5042506RH1294741802185341949185342129Ratregion
5042632RH1295511992190889013190889212Ratregion
5042146RH1292661602190525594190525754Ratregion
5041144RH1286881502186169892186170042Ratregion
5040626RH1283912192190219278190219497Ratregion
5075660RH1387231552185609809185609964Ratregion
5072370RH1368101662187950689187950855Ratregion
5072578RH1369301822185272534185272716Ratregion
5076856RH1394182152192265222192265437Ratregion
5076860RH1394201632190591349190591512Ratregion
5076952RH1394741802187950776187950956Ratregion
5077300RH1396771892188366385188366574Ratregion
5077648RH1398771882186139789186139977Ratregion
5077648RH1398771882186171600186171788Ratregion
5076722RH1393401422189614762189614904Ratregion
5079638RH1411172002187584754187584954Ratregion
5078184RH1401921962186200301186200497Ratregion
5078522RH1403921712187587255187587426Ratregion
5079164RH1407722132190218185190218398Ratregion
5080396RH1415552202187951827187952047Ratregion
5078892RH1406122002190690172190690372Ratregion
5071764RH1352712172192451993192452214Ratregion
5072016RH1354162002185349723185350818Ratregion
5072406RH1368311452191249515191249660Ratregion
5070185RH945211582190224625190224783Ratregion
5068908AU0468501652185469980185470447Ratregion
5068908AU0468501652185470287185470447Ratregion
5070348AI5535201132190619248190619361Ratregion
5069142AU0466981322187238433187238565Ratregion
5061912AW5275591622189298878189299040Ratregion
5062014BI2881631612192850697192850858Ratregion
5062102BF3974462142192395755192395969Ratregion
5065332AA9571412482191311825191312073Ratregion
5060480BE0982261522191718454191718606Ratregion
5063964BE1203211892185278103185278292Ratregion
5060898BF3959111272188813845188813972Ratregion
5064384BF399184972192379867192379964Ratregion
5060318AW5313771882190593094190593282Ratregion
5061888BI2940191512192123401192123552Ratregion
5060672BE0988381732188469639188469812Ratregion
5065684AA9249852022189581999189582203Ratregion
5060854AI0731071402188898836188898976Ratregion
5061122AW5325361512187949762187949913Ratregion
5084188AA9450341492187949033187949182Ratregion
5086859AI4548061512191950467191950618Ratregion
5086197AA8593391902191555197191555387Ratregion
5087028AA8507951712192292095192292266Ratregion
5087126BM3885341852191237064191237249Ratregion
5087402NGFB1472189953767189953914Ratregion
5087476PMC20267P12942189953922189954216Ratregion
5089763AU0493492902186755729186756019Ratregion
5089769AU0493532202191011622191011892Ratregion
5089769AU0493532202191011672191011892Ratregion
5087378BQ1954261522187952689187952841Ratregion
5083303BF4175091202192595242192595362Ratregion
5088311AU0484942812186543013186543294Ratregion
5088409AU0485521432185150278185150421Ratregion
5089473AU0491762622191513025191513287Ratregion
5090551AU0498191802190558753190558933Ratregion
5084142AI4078732282188323009188323237Ratregion
5081511BF420231972185317848185317945Ratregion
5081527BE1171761702187888827187888997Ratregion
5087728UniSTS:1412731412188710902188711043Ratregion
5085403BE1021371962190524229190524425Ratregion
5080790RH1417832052185368647185368852Ratregion
5081096RH1419621832188470351188470534Ratregion
5085693AI1767631522188406112188406264Ratregion
5090277AU0496552122187592079187592291Ratregion
5086036BM3838861932188791545188791738Ratregion
5084566AI4104522312187947647187947878Ratregion
5084676AA945938992185140293185140392Ratregion
5084722AI0082622092192144625192144834Ratregion
5083035BI2750301572189249707189249865Ratregion
5086510BQ2063881982188421221188421419Ratregion
5086677BE1152591672191528530191528697Ratregion
5085635AI0710552872188403177188403464Ratregion
5083549BI2761041892192452553192452742Ratregion
5081919BE1187551502189643290189643440Ratregion
5083855AI2320871132186200359186200472Ratregion
5507711L182489812190417342190418323Ratregion
5503887HSD3B1742186096288186096462Ratregion
5504746PMC86690P21452190584992190585137Ratregion
5504748PMC86690P31842190584992190585176Ratregion
5504620PMC316567P21852190584991190585176Ratregion
5499807UniSTS:2347892092192434174192434383Ratregion
5499809UniSTS:2347861972189592207189592404Ratregion
5500543RH1359001012191519111191519212Ratregion
5500384GDB:37498814152187060201187061616Ratregion
5501496D3S14966482192194035192194683Ratregion
5501882MARC_16743-16744:1020436454:14752187857681187858156Ratregion
5501688Notch22872185739686185739973Ratregion
5502016MARC_23709-23710:1030738086:111992185354838185356037Ratregion
5506809G459511922192236475192236667Ratregion
5502351RH1245731072191520236191520343Ratregion
Position Markers

Peak: (Atp1a1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22189,020,722 - 189,048,826 (-)NCBI
mRatBN7.2 Ensembl2189,020,722 - 189,048,837 (-)Ensembl
UTH_Rnor_SHR_Utx2196,653,579 - 196,681,622 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.02194,505,708 - 194,533,839 (-)NCBI
UTH_Rnor_WKY_Bbb_1.02189,331,424 - 189,359,536 (-)NCBI
Rnor_6.02204,003,742 - 204,032,023 (-)NCBI
Rnor_6.0 Ensembl2204,003,742 - 204,032,023 (-)Ensembl
Rnor_5.02223,440,514 - 223,469,880 (-)NCBI
RGSC_v3.42196,657,749 - 196,687,242 (-)NCBI
RGSC_v3.12196,620,502 - 196,649,996 (-)NCBI
Celera2181,455,492 - 181,483,650 (-)NCBI
Cytogenetic Map2q34NCBI
Flank 2: (D2Rat52)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22193,094,852 - 193,094,998 (+)MAPPER
Rnor_6.02208,081,050 - 208,081,195NCBI
Rnor_5.02227,502,003 - 227,502,148UniSTS
RGSC_v3.42200,866,667 - 200,866,813RGD
RGSC_v3.42200,866,668 - 200,866,813UniSTS
RGSC_v3.12200,829,422 - 200,829,567RGD
Celera2185,557,445 - 185,557,622UniSTS
RH 3.4 Map21366.3RGD
RH 3.4 Map21366.3UniSTS
RH 2.0 Map21028.7RGD
SHRSP x BN Map273.4398RGD
Cytogenetic Map2q34UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243154682202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118275202447032Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)274786664206665859Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)276539322202447032Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)278665619219826953Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)281689826221035911Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)281754530222436696Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2112456140212696837Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2112456140212696837Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2114837527185876470Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2114837527185876470Rat
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2114837675212549332Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2133914684202447032Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2135552573202446871Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2135552573202446871Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2135552573202446871Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)2135552573202446871Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)2135552573202446871Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2136445150202447032Rat
1581502Esta3Estrogen-induced thymic atrophy QTL 3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2136916935189599348Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2136916935213594495Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2141194931223265385Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2141194931223265385Rat
71113Cari2Carrageenan-induced inflammation QTL 22.70.009hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)2141596551202447032Rat
724568Uae13Urinary albumin excretion QTL 134.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)2143157029210020885Rat
10043136Iddm54Insulin dependent diabetes mellitus QTL 543.40.0001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2143657411190602963Rat
10043136Iddm54Insulin dependent diabetes mellitus QTL 543.40.0001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2143657411190602963Rat
61401Niddm2Non-insulin dependent diabetes mellitus QTL 24.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2144599348189599348Rat
1598833Bp295Blood pressure QTL 2953.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2147798556192798556Rat
1641925Alcrsp2Alcohol response QTL 2response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561221167075Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561249053267Rat
1598805Memor8Memory QTL 83exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)2150341585189039377Rat
631501Bp101Blood pressure QTL 1012.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2150341684202446871Rat
2301966Bp322Blood pressure QTL 3223.58arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2150540301202447032Rat
1354609Niddm62Non-insulin dependent diabetes mellitus QTL 624.720.000006insulin secretion trait (VT:0003564)plasma insulin level (CMO:0000342)2150540301202447032Rat
12879836Kidm61Kidney mass QTL 610.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2152413072185122374Rat
12879837Am2Aortic mass QTL 20.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2152413072185122374Rat
12879838Cm86Cardiac mass QTL 860.002heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2152413072185122374Rat
12879839Cm85Cardiac mass QTL 850.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2152413072185122374Rat
12879840Bw179Body weight QTL 1790.005body mass (VT:0001259)body weight (CMO:0000012)2152413072185122374Rat
1359032Hrtrt18Heart rate QTL 18heart pumping trait (VT:2000009)heart rate (CMO:0000002)2157142078192625452Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)2157142078211086598Rat
8662843Vetf9Vascular elastic tissue fragility QTL 92.05thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2157142078226277316Rat
1302793Bw16Body weight QTL 1650.0001body mass (VT:0001259)body weight (CMO:0000012)2157142209202446871Rat
7488925Bp364Blood pressure QTL 3640.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2160564068205564068Rat
1358356Srcrt1Stress Responsive Cort QTL13.66blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)2161699179222436696Rat
7488927Bp365Blood pressure QTL 3650.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2162765032207765032Rat
2306901Bp337Blood pressure QTL 3370.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2164073756227146641Rat
1598838Bp290Blood pressure QTL 2901.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2166539266211539266Rat
1549833Bp257Blood pressure QTL 2570.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168354880185122374Rat
1331734Bp204Blood pressure QTL 2043.61192arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168358098223265385Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2168594495213594495Rat
61469Bp16Blood pressure QTL 165.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
70162Bp63Blood pressure QTL 635.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
2293084Iddm26Insulin dependent diabetes mellitus QTL 262.9blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2174930955213594495Rat
2300189Bmd48Bone mineral density QTL 485.80.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)2179335906224335906Rat
61417Cia10Collagen induced arthritis QTL 103.4joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)2179946951224946951Rat
8694435Bw166Body weight QTL 16614.080.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)2182171407227171407Rat
9589044Scfw1Subcutaneous fat weight QTL 15.80.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)2182171407227171407Rat
8694383Bw158Body weight QTL 1587.690.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)2182171407227171407Rat
8694194Abfw1Abdominal fat weight QTL 111.70.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)2182171407227171407Rat
4889834Pur24Proteinuria QTL 245.80.014urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)2184114274202447032Rat
738013Alc15Alcohol consumption QTL 154.10.00022consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)2184165752229165752Rat
7488929Bp366Blood pressure QTL 3660.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2184974550193094998Rat
1359031Bp275Blood pressure QTL 275arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2185876309219753474Rat
1359031Bp275Blood pressure QTL 275arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2185876309219753474Rat
61458Bp10Blood pressure QTL 103.42arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189020722215287351Rat
1298083Bp158Blood pressure QTL 1582.62arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189020722215287351Rat
1331745Bp203Blood pressure QTL 2034.377arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2189599258218414891Rat
1581499Esta2Estrogen-induced thymic atrophy QTL 2thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2189599258226936289Rat
61366Iddm3Insulin dependent diabetes mellitus QTL 34.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2189599258234599258Rat
61398Bp50Blood pressure QTL 504.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189599258234599258Rat
10043139Iddm55Insulin dependent diabetes mellitus QTL 553.10.0001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2190602746192625452Rat
10043139Iddm55Insulin dependent diabetes mellitus QTL 553.10.0001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2190602746192625452Rat
2301408Kidm36Kidney mass QTL 360.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2190613715226808892Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general measurement method: selected males were weaned at 21 days of age then fed 2% NaCl diet starting from 35 days of age; telemetric probes were implanted at 56 days of age 7421631
qtl_general number of animals used: 9 gender: male 7421631
qtl_general software package used: ANOVA followed by Dunnett test 7421631
qtl_general region spans 4.68 Mb and 57 genes reside in this region 7421631