Lnnr4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Lnnr4 (Liver neoplastic nodule remodeling QTL 4) Rattus norvegicus

Symbol: Lnnr4
Name: Liver neoplastic nodule remodeling QTL 4
RGD ID: 738036
Also known as: Hcrem4
Trait: liver integrity trait   (VT:0010547)    
Measurement Type: liver remodeling tumorous lesion number   (CMO:0001461)    
LOD Score: 3.64
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2131 - 42,356,786RGD_MAPPER_PIPELINE
Rnor_6.0131 - 47,622,148RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0131 - 52,710,812RGDRnor5.0
RGSC_v3.4131 - 43,835,207RGDRGSC3.4
RGSC_v3.1130 - 43,849,250RGD
Cross Type: intercross
Strains Crossed: COP F344/NRrrc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Vertebrate Trait

Rat Strain
COP  (IEA)
F344/NRrrc  (IEA)

References

References - curated
1. De Miglio MR, etal., Int J Cancer 2004 Aug 10;111(1):9-16.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
9107656LOC103693655uncharacterized LOC1036936551379366193556Rat
1559812Cntnap5acontactin associated protein-like 5A1379860841474Rat
2325079Selenok-ps2selenoprotein K, pseudogene 213207421209225Rat
6502304LOC100909663contactin-associated protein like 5-1-like13329393363815Rat
7654933LOC102546561contactin-associated protein like 5-4-like13427590547011Rat
6502122LOC100909759prohibitin-like13942904943754Rat
9304237LOC103693656uncharacterized LOC1036936561310329361035638Rat
9178488LOC103693657uncharacterized LOC1036936571310574981060197Rat
1587032LOC680851similar to Pyruvate kinase isozyme M21318594051860576Rat
11478897LOC10835263060S ribosomal protein L37 pseudogene1318727561873106Rat
1307724Dseldermatan sulfate epimerase-like1319423841948563Rat
9200689LOC10369152140S ribosomal protein S3a-like1321914982192188Rat
1587015LOC680868similar to LIM and SH3 domain protein 1 (LASP-1) (MLN 50)1322149202215645Rat
7732425LOC102547235uncharacterized LOC1025472351328242912826365Rat
7561767LOC102549429tubulin alpha-1A chain-like1328501222854189Rat
2323123LOC100359921hypothetical LOC1003599211334821713482737Rat
11438657LOC108352631glyceraldehyde-3-phosphate dehydrogenase pseudogene1339955353996550Rat
1583815LOC363956similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin)1340521884053063Rat
2322898LOC100360047ras-GTPase-activating protein SH3-domain binding protein1340563694057765Rat
11450174LOC108352632endogenous retrovirus group K member 18 Pol protein-like1342828904285587Rat
11499933LOC108352607igE-binding protein-like1342869404290205Rat
11427071LOC108352608igE-binding protein-like1342907194292184Rat
2322722LOC100360127CWC22 spliceosome-associated protein homolog1344771294478803Rat
6498838LOC100910338cyclin-G-associated kinase-like1346518764666182Rat
2322939LOC100360006ChaC, cation transport regulator-like 21346684564681668Rat
11412323LOC108352609igE-binding protein-like1349038204904680Rat
11451835LOC108352610igE-binding protein-like1351878855193284Rat
9199041LOC103693659uncharacterized LOC1036936591353674105369234Rat
6498553LOC100910413probable ATP-dependent RNA helicase DDX6-like1353713865373176Rat
1583813LOC363958similar to Eukaryotic translation initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66) (eIF3d)1354089655410580Rat
1565762RGD1565762similar to High mobility group protein 1 (HMG-1)1354800695480782Rat
7588234LOC102550492MLV-related proviral Env polyprotein-like1355363075539829Rat
6498281LOC100910474myosin light polypeptide 6-like1360552786055941Rat
1566343Cntnap5ccontactin associated protein-like 5C1363123027538647Rat
1591709LOC680491similar to heat shock protein 1, alpha1363434026347535Rat
7517597LOC102551071myosin light polypeptide 6-like1364561096456774Rat
11439272LOC108348159contactin-associated protein like 5-1-like1365104256608862Rat
9465687LOC103691529probable crossover junction endonuclease EME2 pseudogene1369476416955713Rat
6496910LOC10091071460S ribosomal protein L36a-like1372981927298762Rat
11493129LOC108352611igE-binding protein-like1378702768014514Rat
9244232LOC103691532solute carrier family 25 member 36 pseudogene1381893158191089Rat
2322665LOC100360184splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)1382192148220762Rat
11470833LOC108352612igE-binding protein-like1382639208291506Rat
1584664LOC681080similar to mesoderm development candidate 11384454038466404Rat
11364438LOC108352633igE-binding protein-like1385146618519525Rat
2322306LOC100360347hypothetical LOC1003603471389574788959136Rat
2322265LOC100360388hypothetical LOC1003603881399783959984760Rat
1562598RGD1562598similar to 60S ribosomal protein L4 (L1)131007984810080864Rat
1583494LOC681197similar to FERM domain containing 3131065389110655643Rat
11435183LOC108348121contactin-associated protein like 5-1-like131225562312846637Rat
11462184LOC108352511uncharacterized LOC108352511131263887312661679Rat
7716636LOC102552627zinc finger protein 160-like131306584513079535Rat
6485077LOC100912998zinc finger protein 420-like131315586213160445Rat
11516566LOC108352512uncharacterized LOC108352512131327637713286129Rat
6494480LOC100911239uncharacterized LOC100911239131331180913331500Rat
6485120LOC100913016zinc finger protein 160-like131343056913442518Rat
6484751LOC100913022zinc finger protein 420-like131348428313491931Rat
7740563Znf658zinc finger protein 658131357970613734552Rat
9158796LOC103691566protein ZNF738-like131365627313657793Rat
9166063LOC103691565zinc finger protein 736-like131370679713707854Rat
9321253LOC103693660zinc finger protein 850-like131374729713832169Rat
7681392LOC102553130zinc finger protein 665-like131389012613940796Rat
11378971LOC108352513igE-binding protein-like131408103214082159Rat
1587089LOC679594similar to polyubiquitin131431568414316008Rat
1592077LOC304725similar to contactin associated protein-like 5 isoform 1131437364515396535Rat
7577955LOC102553422cellular tumor antigen p53-like131457963214581237Rat
7529420LOC102553684eukaryotic initiation factor 4A-I-like131504557515047636Rat
11463110LOC108352634endogenous retrovirus group K member 9 Pol protein-like131613101116132946Rat
1585944LOC679645similar to prohibitin131631120816312101Rat
11465046LOC108352613uncharacterized LOC108352613131642037216422370Rat
1593260Hspd1-ps8heat shock protein 1, pseudogene 8131667084416673063Rat
1583413LOC682479hypothetical protein LOC682479131737005317370649Rat
9117769LOC103691598methionine adenosyltransferase 2 subunit beta pseudogene131750239317506264Rat
2321136LOC100360923SET and MYND domain containing 3-like131773961317740347Rat
1597466LOC689020similar to heat shock protein 8131808023818081972Rat
1584807LOC679734similar to 40S ribosomal protein S4, Y isoform 2131861475918615515Rat
9091700LOC103691604uncharacterized LOC103691604131863338718654372Rat
2318305LOC100362382CCDC28A protein-like131920925419210051Rat
1561440RGD1561440similar to nemo like kinase131921159619215319Rat
1594544LOC301971similar to kinesin family member 13A131929350619297889Rat
1333799Olr1826-psolfactory receptor pseudogene 1826131937672819377071Rat
1332803Olr1760-psolfactory receptor pseudogene 1760131942987819430626Rat
7667726LOC102555668igE-binding protein-like132026044420267527Rat
1583661LOC679827similar to Ran-specific GTPase-activating protein (Ran-binding protein 1) (RANBP1) (HpaII tiny fragments locus 9a protein)132037527120446644Rat
11457739LOC108352514uncharacterized LOC108352514132066522220685545Rat
6490239LOC100911899transcription factor BTF3-like132099382620995079Rat
1598145LOC679925similar to family with sequence similarity 51, member A1 homolog132148137721482082Rat
1565194Cntnap5bcontactin associated protein-like 5B132167808822591082Rat
11461461LOC108352515endogenous retrovirus group K member 8 Pol protein-like132252405922526510Rat
11519147LOC108352635endogenous retrovirus group K member 9 Pol protein-like132301789123019640Rat
9400371LOC103691625protein phosphatase 1 regulatory subunit 14B pseudogene132333401923338090Rat
9127255LOC103691606histone H3.3-like132350862823509094Rat
1596843LOC680044similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a)132449678624497814Rat
1305438Cdh20cadherin 20132463029824914463Rat
7498875LOC102547165uncharacterized LOC102547165132489977224913319Rat
9275505LOC103691607uncharacterized LOC103691607132500613425010921Rat
9160875LOC103691608uncharacterized LOC103691608132511330625116329Rat
1305251Rnf152ring finger protein 152132518329525262785Rat
9294666LOC103693667uncharacterized LOC103693667132526214625292751Rat
11487605LOC108352636uncharacterized LOC108352636132547393325477785Rat
6487798LOC100912334ubiquitin-like protein FUBI-like132548237325482716Rat
1311346Pignphosphatidylinositol glycan anchor biosynthesis, class N132551059325662943Rat
1307235RelchRAB11 binding and LisH domain, coiled-coil and HEAT repeat containing132565698325752792Rat
1563614Tnfrsf11aTNF receptor superfamily member 11A132577830625835802Rat
7645713LOC102549134uncharacterized LOC102549134132586025825864748Rat
11469342LOC108352516uncharacterized LOC108352516132586581425875824Rat
7701520LOC102550337uncharacterized LOC102550337132587779825887766Rat
7641700LOC102550524uncharacterized LOC102550524132591813625924487Rat
7514956LOC102550458uncharacterized LOC102550458132592827225953991Rat
1310626Zcchc2zinc finger CCHC-type containing 2132596176226052472Rat
9314479LOC103693665uncharacterized LOC103693665132604822726052472Rat
621308Phlpp1PH domain and leucine rich repeat protein phosphatase 1132614598926394505Rat
9447781LOC103691610uncharacterized LOC103691610132624199626242229Rat
11394992LOC108352518uncharacterized LOC108352518132645308026454083Rat
11465431LOC108352519uncharacterized LOC108352519132650886826519789Rat
2199Bcl2BCL2, apoptosis regulator132660542626769374Rat
7738114LOC102552849uncharacterized LOC102552849132662461526653558Rat
1307775Kdsr3-ketodihydrosphingosine reductase132677938626812271Rat
1305969Vps4bvacuolar protein sorting 4 homolog B132682526126850460Rat
69342Serpinb5serpin family B member 5132690305226923250Rat
1566382Serpinb12serpin family B member 12132697082426999709Rat
1304661Serpinb13serpin family B member 13132703204827062620Rat
11428602LOC108352637endogenous retrovirus group K member 11 Pol protein-like132709030627092607Rat
1562868Serpinb3aserpin family B member 3A132715350027159319Rat
1549766Serpinb3serpin family B member 3132718670127193211Rat
1306497Serpinb11serpin family B member 11132721738527257181Rat
7576045LOC102553197uncharacterized LOC102553197132724126627249518Rat
1591786LOC680414hypothetical protein LOC680414132727797427281661Rat
71063Serpinb7serpin family B member 7132728245627354775Rat
621823Serpinb2serpin family B member 2132744990727463015Rat
628853Serpinb10serpin family B member 10132746603627483789Rat
7574080LOC102553849tyrosine-protein phosphatase non-receptor type substrate 1-like132759236927594639Rat
6500592LOC100909964tyrosine-protein phosphatase non-receptor type substrate 1-like132764328627676536Rat
1309833Serpinb8serpin family B member 8132787666227914038Rat
1583819LOC363949similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (38 kDa BFA-dependent ADP-ribosylation substrate) (BARS-38)132808393328084962Rat
7752001LOC102556672igE-binding protein-like132879766028799755Rat
7533723LOC102556989uncharacterized LOC102556989132921896129222452Rat
1560523RGD1560523similar to S-adenosylmethionine synthetase gamma form (Methionine adenosyltransferase)133049282930494481Rat
1565627RGD1565627similar to High mobility group protein 1 (HMG-1)133053830230541791Rat
1598193LOC501848similar to macrophage expressed gene 1133062026430622436Rat
11456685LOC108352614stress response protein nst1-like133076328330942370Rat
1594585LOC288930similar to Beta-arrestin-1 (Arrestin, beta 1)133092185530923956Rat
9209511LOC103691611cyclin-dependent kinases regulatory subunit 1 pseudogene133097301530973252Rat
1306856Cdh7cadherin 7133108106431228884Rat
11414926LOC10835261540S ribosomal protein S28 pseudogene133138156231381774Rat
2324722LOC100363168transmembrane protein 64-like133169039731691292Rat
1583818Hnrnpa1-ps1heterogeneous nuclear ribonucleoprotein A1, pseudogene 1133175233431753827Rat
1562794RGD1562794similar to establishment of cohesion 1 homolog 1133184970531852572Rat
2323366LOC100363274UPF3 regulator of nonsense transcripts homolog B-like133200094232001830Rat
1307169Cdh19cadherin 19133234495432469887Rat
7629682LOC102555701elongation factor 2-like133241554032418994Rat
1583817LOC363952similar to Dipeptidyl-peptidase 3 (Dipeptidyl-peptidase III) (DPP III) (Dipeptidyl aminopeptidase III) (Dipeptidyl arylamidase III)133257033532571898Rat
11501111LOC108352638dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like133278260832782724Rat
1561585RGD1561585similar to PLRR-4 polymorphic leucine-rich repeat protein133305988933060872Rat
6496985LOC100910715eukaryotic elongation factor 2 kinase-like133330039233305271Rat
1559752RGD1559752similar to MITF-2B protein133341338633414907Rat
1596977LOC678707similar to malignant T cell amplified sequence 1133382268733823250Rat
6495902LOC100910917zinc finger protein 91-like133390971533935416Rat
11366194LOC108352639igE-binding protein-like133399375733994731Rat
9447165LOC103691664putative protein ZNF720133403873134039287Rat
11399379LOC108352616zinc finger protein 239-like133411902234162060Rat
621107Tsntranslin133424080934251671Rat
708462Nifknucleolar protein interacting with the FHA domain of MKI67133426744234277543Rat
11436919LOC108352520uncharacterized LOC108352520133430257334311778Rat
7688772LOC10254702160S ribosomal protein L7-like133435586834356652Rat
1310970Clasp1cytoplasmic linker associated protein 1133436503834584651Rat
7517596LOC102547127heat shock protein HSP 90-alpha-like133436601434373148Rat
1305456Tfcp2l1transcription factor CP2-like 1133461068934671617Rat
9381430LOC103693668uncharacterized LOC103693668133468038134688481Rat
1585916LOC679673similar to Ubiquitin-conjugating enzyme E2S (Ubiquitin-conjugating enzyme E2-24 kDa) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (E2-EPF5)133479587434824869Rat
1309270Gli2GLI family zinc finger 2133482902135049172Rat
7640155LOC102548578uncharacterized LOC102548578133523860235243905Rat
7715304LOC102548644uncharacterized LOC102548644133530998835312883Rat
2913Inhbbinhibin subunit beta B133543653235442222Rat
619852RalbRAS like proto-oncogene B133549471635531503Rat
1309602Tmem185btransmembrane protein 185B133555462135557952Rat
1311366Epb41l5erythrocyte membrane protein band 4.1 like 5133562247235673449Rat
11415588LOC108352521uncharacterized LOC108352521133567658035678406Rat
620712Ptpn4protein tyrosine phosphatase, non-receptor type 4133567824035858414Rat
1310320Tmem177transmembrane protein 177133592978335933271Rat
1584968Cfap221cilia and flagella associated protein 221133595280836024371Rat
621342Sctrsecretin receptor133603924136090515Rat
628689Tmem37transmembrane protein 37133609466536101443Rat
2490Dbidiazepam binding inhibitor, acyl-CoA binding protein133614766736156076Rat
1594584LOC288978hypothetical LOC288978133615595636244256Rat
708552Steap3STEAP3 metalloreductase133625722036274144Rat
1594583C1ql2complement C1q like 2133637818736379722Rat
1595088En1engrailed homeobox 1133653275836537888Rat
1565260RGD1565260similar to tumor protein, translationally-controlled 1133691591536916349Rat
7498159LOC102548969uncharacterized LOC102548969133713798137175532Rat
631417Insig2insulin induced gene 2133726481837292718Rat
7536945LOC102552107uncharacterized LOC102552107133729317637304008Rat
1560504Ccdc93coiled-coil domain containing 93133740045537473973Rat
62388Htr5b5-hydroxytryptamine (serotonin) receptor 5B133747975837492680Rat
1549712Ddx18DEAD-box helicase 18133752255837536066Rat
6490323LOC100911912heterogeneous nuclear ribonucleoprotein A3-like133756359037564618Rat
9380288LOC103690256developmental pluripotency-associated protein 2 pseudogene133769560437696520Rat
9476423LOC103690298NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 pseudogene133769727337697570Rat
2318304LOC100362383DnaJ (Hsp40) homolog, subfamily C, member 10-like133796588137967146Rat
11369155LOC108352640uncharacterized LOC108352640133818883438206445Rat
6489269LOC100912003uncharacterized LOC100912003133855391338561652Rat
11501382LOC108352641glyceraldehyde-3-phosphate dehydrogenase pseudogene133916766839168681Rat
1306427Dpp10dipeptidyl peptidase like 10133943059041173706Rat
9387520LOC103691651uncharacterized LOC103691651134078954640792350Rat
11432035LOC108352624uncharacterized LOC108352624134103988141047589Rat
7713048LOC102554127uncharacterized LOC102554127134136937041371090Rat
71024Actr3actin related protein 3134169552041738622Rat
7577736LOC102554198uncharacterized LOC102554198134173894241758961Rat
2324561LOC100362110LRRGT00155-like134180254741836153Rat
11470297LOC108352523uncharacterized LOC108352523134185155941860791Rat
1308125Slc35f5solute carrier family 35, member F5134188273341922358Rat
1306745Gpr39G protein-coupled receptor 39134200864242220737Rat
1549754Lypd1Ly6/Plaur domain containing 1134221988442263024Rat
1564507Nckap5NCK-associated protein 5134226587543049232Rat
1592076LOC304754similar to Proteasome activator complex subunit 2 (Proteasome activator 28-beta subunit) (PA28beta) (PA28b) (Activator of multicatalytic protease subunit 2) (11S regulator complex beta subunit) (REG-beta)134307951243080402Rat
1560333RGD1560333similar to Ferritin light chain (Ferritin L subunit)134338499943385544Rat
1563709RGD1563709similar to K-ALPHA-1 protein134340127343402677Rat
1589434LOC680642similar to cysteine and glycine-rich protein 2134346528143475972Rat
11417017LOC108352524cysteine and glycine-rich protein 2 pseudogene134347269443476059Rat
11459344LOC108352525uncharacterized LOC108352525134350746243511464Rat
2325611Mir350microRNA 350134382749243827590Rat
620100Mgat5alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase134385074444157860Rat
1306212Tmem163transmembrane protein 163134416630644345735Rat
620868Acmsdaminocarboxymuconate semialdehyde decarboxylase134442468944468734Rat
11509631LOC108352526uncharacterized LOC108352526134446975144475881Rat
1309205Ccnt2cyclin T2134447595944516892Rat
1566400Map3k19mitogen-activated protein kinase kinase kinase 19134452405544553197Rat
1306487Rab3gap1RAB3 GTPase activating protein catalytic subunit 1134457820844649876Rat
1564952Zranb3zinc finger RANBP2-type containing 3134466137544812430Rat
7489024Mir3473microRNA 3473134471933544719401Rat
7672249LOC102548555COX assembly mitochondrial protein homolog134473168844733196Rat
1307497R3hdm1R3H domain containing 1134481256744950762Rat
7506261LOC102548453male-enhanced antigen 1-like134483358144838617Rat
2325574Mir128-1microRNA 128-1134491653444916615Rat
1307451Ubxn4UBX domain protein 4134495696344989653Rat
11453963LOC10835252760S ribosomal protein L37 pseudogene134496674944967160Rat
620823Lctlactase134499841445040593Rat
61967Mcm6minichromosome maintenance complex component 6134504288245068073Rat
621167Dars1aspartyl-tRNA synthetase 1134507406745127815Rat
2321949LOC100360508ribosomal protein S26-like134507985745080277Rat
7623570LOC102548646uncharacterized LOC102548646134508775645094548Rat
1587045LOC680838hypothetical protein LOC680838134514846845150144Rat
620465Cxcr4C-X-C motif chemokine receptor 4134531495245318856Rat
7667252LOC102548838uncharacterized LOC102548838134541210745418999Rat
7640179LOC102548908uncharacterized LOC102548908134557391645588310Rat
11371098LOC108352642glyceraldehyde-3-phosphate dehydrogenase-like134571014845711151Rat
2321906LOC100360551GABA(A) receptor-associated protein-like 2-like134592026245920615Rat
1306938Thsd7bthrombospondin type 1 domain containing 7B134602694346931619Rat
2321708LOC100360649mitochondrial ribosomal protein L30134698833846988811Rat
620651Cd55CD55 molecule (Cromer blood group)134712515647153557Rat
11382668LOC108352528glyceraldehyde-3-phosphate dehydrogenase pseudogene134723233247233380Rat
727846Zp3rzona pellucida 3 receptor134728637547331213Rat
2235C4bpacomplement component 4 binding protein, alpha134734209047377580Rat
2321508LOC100360750Sm protein F-like134738037647382933Rat
2236C4bpbcomplement component 4 binding protein, beta134738717347398115Rat
3309Pfkfb26-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2134741345347440682Rat
1359726Yod1YOD1 deubiquitinase134744129647443013Rat
1565034LOC498222similar to specifically androgen-regulated protein134745243647467432Rat
1584674FcamrFc fragment of IgA and IgM receptor134753805247552370Rat
3328Pigrpolymeric immunoglobulin receptor134756417647592093Rat
1359282FcmrFc fragment of IgM receptor134760270147617065Rat
621484Il24interleukin 24134761845147623849Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10461D13Wox14205133614753036147728Ratregion
10462D13Mgh13139133614753336147665Ratregion
10809D13Mgh16140133543765035437793Ratregion
11084D13Mgh12125134742151547421639Ratregion
11101D13Wox15144134758943747589577Ratregion
33923D13Mit11241390167429016906Ratregion
34076D13Mgh1149132148248121482635Ratregion
34140D13Mgh2128133659626536596396Ratregion
34351D13Mgh4150134231074442310885Ratregion
34371D13Mgh3142133937292739373058Ratregion
36251D13Rat81761395553499555508Ratregion
36289D13Rat36176131207293412073083Ratregion
37396D13Rat932271337367583737004Ratregion
37408D13Rat103171133651412536514301Ratregion
37420D13Rat70194133738644237386643Ratregion
35170D13Rat12136133664195236642085Ratregion
35208D13Rat2165132211390222114054Ratregion
35543D13Rat21150134762199947622148Ratregion
35557D13Rat18146133907152939071678Ratregion
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5503288UniSTS:237739237133184924231849478Ratregion
5503446UniSTS:461954348132676865126768998Ratregion
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10755478rs105290310133950130039501300Ratregion
Position Markers

Peak: (D13Rat7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21311,766,535 - 11,766,737 (+)MAPPER
Rnor_6.01314,279,081 - 14,279,282NCBI
Rnor_5.01319,518,130 - 19,518,331UniSTS
RGSC_v3.4131,084,269 - 1,084,470UniSTS
RGSC_v3.4131,084,268 - 1,084,470RGD
RGSC_v3.1131,084,268 - 1,084,470RGD
Celera1311,796,004 - 11,796,205UniSTS
SHRSP x BN Map131.1799UniSTS
SHRSP x BN Map131.1799RGD
FHH x ACI Map133.68RGD
Flank 2: (D13Rat21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21342,356,636 - 42,356,786 (+)MAPPER
Rnor_6.01347,621,999 - 47,622,148NCBI
Rnor_5.01352,710,663 - 52,710,812UniSTS
RGSC_v3.41343,835,057 - 43,835,207RGD
RGSC_v3.41343,835,058 - 43,835,207UniSTS
RGSC_v3.11343,849,101 - 43,849,250RGD
Celera1342,706,106 - 42,706,255UniSTS
RH 3.4 Map13112.4RGD
RH 3.4 Map13112.4UniSTS
RH 2.0 Map13306.3RGD
SHRSP x BN Map1310.2499RGD
Cytogenetic Map13q13UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317027Aia22Adjuvant induced arthritis QTL 222.29joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)13136779181Rat
738036Lnnr4Liver neoplastic nodule remodeling QTL 43.64liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)13147622148Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131107975663Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131107975663Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131107975663Rat
631672Iddm12Insulin dependent diabetes mellitus QTL 122.20.0032blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)13901674239373058Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13901674250513953Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13901690682995569Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13901690682995569Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)1312193394108478121Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)131409633059096330Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)131409633059096330Rat
2303031Bp326Blood pressure QTL 326arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131427908126919398Rat
2317034Aia9Adjuvant induced arthritis QTL 94.62joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131427908137124697Rat
2317044Aia23Adjuvant induced arthritis QTL 232.3joint integrity trait (VT:0010548)ankle joint diameter (CMO:0002148)131427908137124697Rat
1300163Cardf1Cardiac cell morphology QTL 14.18aorta morphology trait (VT:0000272)artery lesion measurement (CMO:0000975)131444158250799665Rat
2302275Gluco37Glucose level QTL 373.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)131444158251577031Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131462463159624631Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131462463159624631Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131981081464810814Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)132005247765052477Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)132148248158537177Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1324502279108770533Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132800833873008338Rat
70170Eae14Experimental allergic encephalomyelitis QTL 140.0024nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)132858445273584452Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132907693474076934Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132907693474076934Rat
2303030Bp327Blood pressure QTL 327arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133530126346444796Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1335301263107975663Rat
2301962Cm72Cardiac mass QTL 724.12heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)133614753364868393Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133614753399968921Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133614753399968921Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133614753399968921Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133614753399968921Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133734634882346348Rat
61453Pur1Proteinuria QTL 118.06total urine protein amount (VT:0000032)urine protein level (CMO:0000591)133937292742310885Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133937292784372927Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133950130093652524Rat
2292232Pur16Proteinuria QTL 1617.2total urine protein amount (VT:0000032)urine protein level (CMO:0000591)134106005747227923Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134215554344588509Rat
4889861Pur29Proteinuria QTL 2913.80.005total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)134231074486833540Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)134231074487310744Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)134250834587508345Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)134250834587508345Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)134357571788575717Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134567662990676629Rat
2303032Bp328Blood pressure QTL 328arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134644457050799665Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Lnnr4

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross