Mamtr3 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Mamtr3 (Mammary tumor resistance QTL 3) Rattus norvegicus

Symbol: Mamtr3
Name: Mammary tumor resistance QTL 3
RGD ID: 731179
Previously known as: Mcs10; Mcs1b
Trait: mammary gland integrity trait   (VT:0010552)    
Measurement Type: mammary tumor number   (CMO:0000343)    
LOD Score: Not Available
P Value: 1.0E-4
Variance: Not Available
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2232,373,770 - 43,665,178RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0231,224,612 - 43,643,900RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0250,381,686 - 62,691,053RGDRnor5.0
RGSC_v3.4232,051,319 - 43,376,636RGDRGSC3.4
RGSC_v3.1231,971,688 - 43,304,868RGD
Cross Type: intercross
Strains Crossed: WF.COP-(D2Rat253-D2Uwm17)/Uwm 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method
necropsy  (IDA)

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Rat Mcs1b is concordant to the genome-wide association-identified breast cancer risk locus at human 5q11.2 and MIER3 is a candidate cancer susceptibility gene. denDekker AD, etal., Cancer Res. 2012 Nov 15;72(22):6002-12. doi: 10.1158/0008-5472.CAN-12-0748. Epub 2012 Sep 19.
2. Congenic rats reveal three independent Copenhagen alleles within the Mcs1 quantitative trait locus that confer resistance to mammary cancer. Haag JD, etal., Cancer Res 2003 Sep 15;63(18):5808-12.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
11494182Rpl21l6ribosomal protein L21 like 623252930632531079Rat
7668930LOC102556051uncharacterized LOC10255605123253577832855354Rat
41022741LOC120100691uncharacterized LOC12010069123261736632625636Rat
3329Pik3r1phosphoinositide-3-kinase regulatory subunit 123287894232963668Rat
11390954LOC108350224uncharacterized LOC10835022423313033033134546Rat
41078971LOC120100692uncharacterized LOC12010069223343819133470167Rat
41325769LOC120101262small nucleolar RNA SNORA4823344337933443518Rat
9191663LOC103691443uncharacterized LOC10369144323344482133447613Rat
1595422Nme2-ps7NME/NM23 nucleoside diphosphate kinase 2, pseudogene 723347098033472009Rat
41258804LOC120101170U6 spliceosomal RNA23347197733472081Rat
41007476Casp6-ps3caspase 6, pseudogene 323351689533520476Rat
7497054LOC102546726uncharacterized LOC10254672623355267833777029Rat
41190503LOC120100693uncharacterized LOC12010069323367858233734740Rat
11381588LOC108349935uncharacterized LOC10834993523384297833850878Rat
1308170Cd180CD180 molecule23385594033870046Rat
1310139Mast4microtubule associated serine/threonine kinase family member 423389324134483682Rat
40982580LOC120101075uncharacterized LOC12010107523389787433938550Rat
41232441LOC120101238small nucleolar RNA SNORA1523402219734022326Rat
40934274LOC120101078uncharacterized LOC12010107823409371134095907Rat
41056464LOC120101077uncharacterized LOC12010107723447471034477122Rat
41053152LOC120100556uncharacterized LOC12010055623460940034615966Rat
621696Srek1splicing regulatory glutamic acid and lysine rich protein 123484954834885120Rat
1562952Erbinerbb2 interacting protein23492696235028440Rat
7672686Aktip-ps2AKT interacting protein, pseudogene 223505758135059009Rat
41030574LOC120100694uncharacterized LOC12010069423509379335099838Rat
621518Nlnneurolysin23513363435232927Rat
727976Sgtbsmall glutamine rich tetratricopeptide repeat co-chaperone beta23523304535269527Rat
1306583Trappc13trafficking protein particle complex subunit 1323527049535302049Rat
41350418Shld3shieldin complex subunit 323529725535302071Rat
621587Trim23tripartite motif-containing 2323530240535335746Rat
1310204Ppwd1peptidylprolyl isomerase domain and WD repeat containing 123533730135360661Rat
1310461Cenpkcentromere protein K23536039035421372Rat
1307678Adamts6ADAM metallopeptidase with thrombospondin type 1 motif, 623542148335633305Rat
41113370LOC120101138U6 spliceosomal RNA23552861635528722Rat
41347556C1h11orf98-ps1similar to human chromosome 11 open reading frame 98, pseudogene 123561335735613723Rat
41029337Rps29-ps14ribosomal protein S29, pseudogene 1423574579835764518Rat
1310697Cwc27CWC27 spliceosome associated cyclophilin23576467435975908Rat
1305356Srek1ip1SREK1-interacting protein 123597597835999636Rat
1564672Shisal2bshisa like 2B23600262236019529Rat
1309360Rgs7bpregulator of G-protein signaling 7 binding protein23613394436231505Rat
1595064Rnf180ring finger protein 18023633028536511168Rat
40954385LOC120101342small nucleolar RNA SNORA1723644024536440364Rat
2845Htr1a5-hydroxytryptamine receptor 1A23669346236698026Rat
1594381Rpl17l3ribosomal protein L17 like 323692858836929161Rat
9151583LOC103691446uncharacterized LOC10369144623719043137463186Rat
1560462Rpl10a-ps14ribosomal protein L10A, pseudogene 1423719203637193479Rat
7695496LOC102556361uncharacterized LOC10255636123761814037642341Rat
1311133Ipo11importin 1123816968838342929Rat
41272581Lrrc70leucine rich repeat containing 7023821587138218476Rat
1311752Dimt1DIM1 rRNA methyltransferase and ribosome maturation factor23834308638368242Rat
70974Kif2akinesin family member 2A23836799838431237Rat
1564606Rpl23al1ribosomal protein L23A like 123845281438453384Rat
7517146LOC102546512uncharacterized LOC10254651223852728838537176Rat
41348725LOC120101157U6 spliceosomal RNA23858377138583877Rat
11413279LOC108349939uncharacterized LOC10834993923861681938657106Rat
11449327LOC108349941uncharacterized LOC10834994123877523038811284Rat
41288964LOC120100698uncharacterized LOC12010069823886524538876526Rat
41265315LOC120100699uncharacterized LOC12010069923892561638943051Rat
7751753LOC102546727uncharacterized LOC10254672723897359938994374Rat
11452971LOC108349942uncharacterized LOC10834994223903661239069876Rat
9150057LOC103691449uncharacterized LOC10369144923913897439167216Rat
1306624Zswim6zinc finger, SWIM-type containing 623921113139378877Rat
41167126LOC120100700uncharacterized LOC12010070023939181139400380Rat
41019158LOC120100701uncharacterized LOC12010070123943749039446872Rat
41204573LOC120100702uncharacterized LOC12010070223949465539499673Rat
7567902LOC102549347uncharacterized LOC10254934723950006339528170Rat
2324600Smim15small integral membrane protein 1523952825639533416Rat
1560158Ndufaf2NADH:ubiquinone oxidoreductase complex assembly factor 223953568039647378Rat
1311570Ercc8ERCC excision repair 8, CSA ubiquitin ligase complex subunit23964739339686229Rat
41213703LOC12010055760S ribosomal protein L29-like23971531539716074Rat
1560076Rpl29-ps23ribosomal protein L29, pseudogene 2323972031939720958Rat
41036237Egln1-ps5egl-9 family hypoxia-inducible factor 1, pseudogene 523974837339749980Rat
1310560Elovl7ELOVL fatty acid elongase 723978922939858579Rat
11419093LOC108350211uncharacterized LOC10835021123984997239855243Rat
1305799Depdc1bDEP domain containing 1B23989116339963779Rat
3281Pde4dphosphodiesterase 4D24001493341529190Rat
41308577LOC120101083uncharacterized LOC12010108324027851940287658Rat
40993190Trnav-aac36transfer RNA valine (anticodon AAC) 3624060367340603753Rat
2325413Mir582microRNA 58224092857140928651Rat
11487276LOC108350210uncharacterized LOC10835021024102007441032958Rat
41368707LOC120101082uncharacterized LOC12010108224106763841091014Rat
41024273LOC120101084uncharacterized LOC12010108424131450641320081Rat
11451820LOC108349943uncharacterized LOC10834994324158493541590024Rat
620923Rab3cRAB3C, member RAS oncogene family24162772041843541Rat
1586621GaptGrb2-binding adaptor protein, transmembrane24192753341932120Rat
620760Plk2polo-like kinase 224196917641974945Rat
1585493Slc25a5-ps7solute carrier family 25 member 5, pseudogene 724210259442103565Rat
9436047LOC103691451uncharacterized LOC10369145124272675242733899Rat
1560402Pgk1l1phosphoglycerate kinase 1 like 124275460542755929Rat
1309504Actbl2actin, beta-like 224285802042860767Rat
1305492Gpbp1GC-rich promoter binding protein 124302350443091146Rat
41081966Trnap-agg68transfer RNA proline (anticodon AGG) 6824319849743198577Rat
1311241Mier3MIER family member 324328754643316422Rat
9201190LOC103691453activated RNA polymerase II transcriptional coactivator p15 pseudogene24329894943300263Rat
2318781Setd9-ps1SET domain containing, pseudogene 124331935943322764Rat
620966Map3k1mitogen-activated protein kinase kinase kinase 124334857243414706Rat
7683682LOC102553935uncharacterized LOC10255393524342026843436706Rat
7736543LOC102554057uncharacterized LOC10255405724349634343504404Rat
7606174LOC102554307uncharacterized LOC10255430724364744143693619Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10924D2Mit318424328333143283515Ratregion
10925D2Wox1213224328330043283432Ratregion
34278D2Mgh1412024315456643154682Ratregion
34397D2Mgh214524006794440068089Ratregion
34425D2Mgh112923513484135134970Ratregion
34514D2Mit3116523669541436695579Ratregion
37520D2Rat11612223409103934091161Ratregion
35250D2Rat1313623808169038081826Ratregion
35292D2Rat1817624112578941125954Ratregion
36896D2Rat912423374476633744889Ratregion
37018D2Rat1413124280460742804738Ratregion
36428D2Rat1019323602318436023379Ratregion
36470D2Rat1617024366500843665178Ratregion
36532D2Rat1112123493800734938128Ratregion
35941D2Rat1215323937437639374529Ratregion
39874D2Rat19814824316236643162530Ratregion
38064D2Rat15320424278647942786683Ratregion
38476D2Rat14210924259119142591300Ratregion
38770D2Rat18421924034010640340327Ratregion
38770D2Rat18421924034010640340593Ratregion
38770D2Rat18421924034027540340327Ratregion
42104D2Arb127923852858938528872Ratregion
41158D2Rat19726024006783540068095Ratregion
41380D2Rat19516523420301234203179Ratregion
42564D2Rat31210623946200539462111Ratregion
41538D2Rat19914324124396341244106Ratregion
44552D9Wox2113623740565337405710Ratregion
43463D2Got1422823750492237505150Ratregion
43464D2Got2120823808329338083501Ratregion
43465D2Got2018923808168538081874Ratregion
43466D2Got2329223751261037512902Ratregion
43467D2Got2414224157675441576896Ratregion
43468D2Got1917123785178437851955Ratregion
43469D2Got1717323988474239884915Ratregion
43470D2Got1819223936291339363105Ratregion
43471D2Got2223923927635739276596Ratregion
43472D2Got1613723903305739033194Ratregion
43473D2Got1510223617934336179445Ratregion
43483D2Got19510423311776833117872Ratregion
43485D2Got1014423284403732844191Ratregion
43486D2Got1210623476314034763246Ratregion
43488D2Got18217824312539943125962Ratregion
43488D2Got18217824312578443125962Ratregion
43489D2Got18118624294670342946889Ratregion
60793D2Wox310424317101743171121Ratregion
60795D2Wox49324317094843171041Ratregion
60750D2Rat31710624115006841150174Ratregion
60319D2Got2511824143647241436590Ratregion
60282D2Got1129223408434234084616Ratregion
60288D2Got1329223457022334570514Ratregion
61289D2Mco1918723946319939463386Ratregion
66385D2Mco4321423310317833103392Ratregion
66656D2Mco1517423651947736519658Ratregion
66695D2Mco2522023476309534763315Ratregion
66701D2Mco2720124098660740986991Ratregion
66701D2Mco2720124098677640986991Ratregion
66732D2Mco3720523476305334763258Ratregion
67253D2Arb225124328332343283574Ratregion
67800D2Uwm1733023237377032374088Ratregion
1631604D2Ulb519623477231034772510Ratregion
1632335D2Got37110723360873033608837Ratregion
1639378D2Ulb428823314036733140655Ratregion
1634602D2Got37413523589967635899811Ratregion
9685045rs6569782023922393739223937Ratregion
7206386fb98c02.x1109224114448941145581Ratregion
5036450Pik3r118423288277432882958Ratregion
5036889AU04952519624144973041449926Ratregion
5035721WI-2146725324302403543024288Ratregion
5028991RH14309820723409579734096004Ratregion
5034664BF39085716723293803632938203Ratregion
5029319RH14434621323447713334477346Ratregion
5027089IB167116224197466241974824Ratregion
5035270AI17859011423395553233955646Ratregion
5035318BM38701619723936273739362934Ratregion
5027467U504138423288278132882865Ratregion
5027805RH9481226123288509032885351Ratregion
502794138.MMHAP15FLE5.seq18123264376532643946Ratregion
5025516RH12862220123492762134927822Ratregion
5025646RH12911518423968424639684430Ratregion
5053517RH14269410123420103334201134Ratregion
5055853RH14404018323533606735336250Ratregion
5056307RH14430320823925285539253063Ratregion
5054213RH14309529523550926435509559Ratregion
5059496BE09707620723633029636330503Ratregion
5055013RH14355511023287934932879459Ratregion
5058612BE10219119223264290532643097Ratregion
5056031RH14414313824192808041928218Ratregion
5059666BE09757621723525574535255962Ratregion
5056521RH14442611523579690435797019Ratregion
5058086BF38659818623412671734126903Ratregion
5058146BF38669819923573309335733292Ratregion
5056777RH14457416423952743739527601Ratregion
5059806BI28544116223935671739356879Ratregion
5059170BI27851916824343917143439339Ratregion
5053373RH14261113423563098235631116Ratregion
5053409RH14263212723487705834877185Ratregion
5053475RH14267010023432062534320725Ratregion
5053151RH14248315323830002238300176Ratregion
505166913.MMHAP86FRE7.seq18424114118641141371Ratregion
5043454RH13003518823599936335999551Ratregion
5041584RH12894122023978388739784107Ratregion
5041620RH12896215523600264736002802Ratregion
5044432RH13059921823921125139211469Ratregion
5044580RH13068521223836264538362857Ratregion
5046516RH13179819323492671434926907Ratregion
5049036RH13324921223968587039686082Ratregion
5049242RH13336719423996345039963644Ratregion
5046754RH13193521123576476835764979Ratregion
5048152RH13273821523607975536079970Ratregion
5047272RH13223219223836826038368452Ratregion
5039920RH12798421923288214932882368Ratregion
5048514RH132947023523168435232738Ratregion
5049530RH13353418123880415938804340Ratregion
5039868RH12795319423485174134851935Ratregion
5041236RH12874118023527056635270746Ratregion
5042878RH12969918123533495435335135Ratregion
5042886RH12970318323854993238550115Ratregion
5073968RH13774313724162146041621597Ratregion
9685048rs105751187023984553439845534Ratregion
5075936RH13888315224123016741230319Ratregion
5072736RH13702318523513372935133914Ratregion
5077160RH13959619623836796838368164Ratregion
5078410RH14032624823836941738369665Ratregion
5079832RH14122916524162055541620720Ratregion
5077762RH13994421723389325933893476Ratregion
5079906RH14127118323613752236137705Ratregion
5079958RH14130118323526947535269658Ratregion
5071134RH13490622123484971234849933Ratregion
5073352RH13738615423386860333868757Ratregion
5072050RH13543620823969700839697216Ratregion
5074396RH13799313323529500635295139Ratregion
5074460RH13802912023597826335978383Ratregion
5074552RH13808315323293287732933030Ratregion
5074718RH13817812023293648632936606Ratregion
5071580RH13516420424308865443088858Ratregion
5063368BI30171219323556218535562378Ratregion
5066686AU04821117523934991639350091Ratregion
5068096AU04735018823980880939809001Ratregion
5068376AU04718414323981968639819829Ratregion
5070055RH9444319923669616536696364Ratregion
5069614AU04638219324062937740629570Ratregion
5069616AU04638022524360230843602535Ratregion
5062140BF39749615223928489939285051Ratregion
5060530BE11029717723968365739683834Ratregion
5062674BF40377422024079801740798237Ratregion
5065404AA95756019524302352243023717Ratregion
5062914AA95555318623985838439858570Ratregion
5064506BI29686519823600124636001444Ratregion
5063212BI30143920224355485143555053Ratregion
5087080BQ19287518824135685041357038Ratregion
5086498BF40159421724133146541331682Ratregion
5083197BF39096617924162397741624156Ratregion
5087995Map3k118524334880943348994Ratregion
5088285AU04847816423283995732840121Ratregion
5090643AU04987516423368898433689148Ratregion
5084194AA94506720823821623438216442Ratregion
5084652AI00817122023931989539320115Ratregion
5084812AI1793779223465265534652747Ratregion
5082203BI27412420323950042339500626Ratregion
5085487BE09695915023425007434250224Ratregion
5090745AU04993813523374020033740321Ratregion
5089979AU04947718124333968943339874Ratregion
5081124RH14197820423613405936134264Ratregion
5083147BF39087815623669596636696122Ratregion
5083171BF39091816123613634036136501Ratregion
5085258AW53275016724152864441528811Ratregion
5085792BM39231216523562236335622528Ratregion
5085842BM38290715223513501335135165Ratregion
5083881AI01065111623953379139533907Ratregion
5507507ECD0947662024331578443316404Ratregion
5505654UniSTS:488481155824192783441929393Ratregion
5506915G4794025523940154439401799Ratregion
5506674REN2846526124331604643316307Ratregion
5506676REN2847124124331486143315102Ratregion
5506853G4646529623385878333859079Ratregion
5506670REN2800522824341375043413978Ratregion
5506672REN2835725424334939943349653Ratregion
5500787stSG625181136024331485943316219Ratregion
5500789stSG625182108124331379843314879Ratregion
5500791stSG625183113824331268043313818Ratregion
5500957MARC_9941-9942:996688685:2024332104643321420Ratregion
5501518G0732917123492697034927141Ratregion
5501620REN122C19023816007038161096Ratregion
5501844MARC_15693-15694:1017691889:161923533042335331042Ratregion
5506678REN2860924024328803243288272Ratregion
5502799MIER322524331238443312609Ratregion
5502293RH12430311224308942843089540Ratregion
152025240rs106480153023857332938573329Ratregion
Position Markers

Flank 1: (D2Uwm17)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2232,373,770 - 32,374,088 (+)MAPPER
Rnor_6.0231,224,612 - 31,224,929NCBI
Rnor_5.0250,381,686 - 50,382,003UniSTS
RGSC_v3.4232,051,319 - 32,051,634RGD
RGSC_v3.4232,051,320 - 32,051,637UniSTS
RGSC_v3.1231,971,688 - 31,972,003RGD
Celera228,374,451 - 28,374,776UniSTS
Cytogenetic Map2 RGD
Flank 2: (D2Rat16)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2243,665,008 - 43,665,178 (+)MAPPER
Rnor_6.0243,643,731 - 43,643,900NCBI
Rnor_5.0262,690,884 - 62,691,053UniSTS
RGSC_v3.4243,376,466 - 43,376,635RGD
RGSC_v3.4243,376,467 - 43,376,636UniSTS
RGSC_v3.1243,304,699 - 43,304,868RGD
Celera239,447,656 - 39,447,823UniSTS
RH 3.4 Map2190.2UniSTS
RH 3.4 Map2190.2RGD
RH 2.0 Map2245.7RGD
SHRSP x BN Map218.4498RGD
FHH x ACI Map225.2699RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)243162366111362592Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat
152025242Bw191Body weight QTL 1913.62body mass (VT:0001259)238573329122609194Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
10402051Gdil2Gastrointestinal dilation QTL 2enteric ganglion morphology trait (VT:0001045)length of intestine affected by colonic aganglionosis to total length of colon ratio (CMO:0001836)22490385374786777Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240067944102785628Rat
1331764Bp205Blood pressure QTL 2053.476arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)22699957143154682Rat
731179Mamtr3Mammary tumor resistance QTL 30.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)23237377043665178Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)24317101783575226Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)24280460760653831Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
2300168Bmd47Bone mineral density QTL 476.60.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)22066244865662448Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)21185206249003364Rat
1357990Ael1Aortic elastin QTL 13.10.00091aorta elastin amount (VT:0003905)aortic elastin21907682564076825Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
12879863Bp402Blood pressure QTL 4020.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24112578956532139Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
731184Mamtr4Mammary tumor resistance QTL 40.0003mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)21649174061491740Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23513484188029593Rat
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
7387318Stl32Serum triglyceride level QTL 323.20.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)22238462767384627Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23502311780023117Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1300160Hrtrt3Heart rate QTL 33.62heart pumping trait (VT:2000009)absolute change in heart rate (CMO:0000534)22997159351729300Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
738012Anxrr3Anxiety related response QTL 33.8exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)2902351954023519Rat
9685065Swd6Spike wave discharge measurement QTL 65.80.01brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge rate (CMO:0001739)23922393748793699Rat
9590095Sffal3Serum free fatty acids level QTL 36.780.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)22715716072157160Rat
1600379Mcs18Mammary carcinoma susceptibility QTL 182.6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)2788777242804738Rat
1643006Pain1Pain QTL 13.630.005mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)22699957148268661Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22691781781754745Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
152025206Hrtrt23Heart rate QTL 235.98heart pumping trait (VT:2000009)228484589169504100Rat
152025204Hrtrt22Heart rate QTL 225.6heart pumping trait (VT:2000009)228484589169504100Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Mcs10

RGD Curation Notes
Note Type Note Reference
qtl_cross_pair WFxCOP  
qtl_cross_type intercross  
qtl_disease associated with reduction of mammary carcinomas